Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.81□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm11577-201ENSMUST00000118030 737 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm12102-201ENSMUST00000118251 604 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm9119-201ENSMUST00000118866 495 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm3788-201ENSMUST00000119949 136 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm11438-201ENSMUST00000121582 189 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm23463-201ENSMUST00000122468 99 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm25807-201ENSMUST00000122783 305 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm25666-201ENSMUST00000157702 107 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm25373-201ENSMUST00000158156 115 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm22521-201ENSMUST00000158272 134 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm25451-201ENSMUST00000177832 121 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm23568-201ENSMUST00000177960 92 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm24897-201ENSMUST00000179033 107 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm24829-201ENSMUST00000179245 92 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm27330-201ENSMUST00000184689 132 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm28390-201ENSMUST00000185212 700 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm28356-202ENSMUST00000187566 858 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm42665-201ENSMUST00000202100 586 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm44181-201ENSMUST00000203106 483 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm45614-201ENSMUST00000209994 721 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm18414-201ENSMUST00000210858 694 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trafd1Q3UDK1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm14835-201ENSMUST00000119039 315 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm12042-201ENSMUST00000120479 301 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm15147-201ENSMUST00000122263 483 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm24443-201ENSMUST00000157242 132 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm24910-201ENSMUST00000157289 272 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm22766-201ENSMUST00000158372 99 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm26214-201ENSMUST00000158581 107 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm26701-201ENSMUST00000181571 234 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm32447-201ENSMUST00000194265 697 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm5551-201ENSMUST00000199720 690 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm19177-201ENSMUST00000204520 613 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm44720-201ENSMUST00000206076 260 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm45344-201ENSMUST00000211610 341 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm2446-201ENSMUST00000220144 772 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm7753-201ENSMUST00000221007 867 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm24150-201ENSMUST00000082759 104 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm26458-201ENSMUST00000082832 128 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm24490-201ENSMUST00000083803 98 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm23503-201ENSMUST00000083903 107 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Gm16261-201ENSMUST00000096813 205 ntBASIC2.79□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trafd1Q3UDK1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms