Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm15399-201ENSMUST00000118055 724 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm11606-201ENSMUST00000120706 617 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm16428-201ENSMUST00000121193 723 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm14678-201ENSMUST00000121396 482 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm11254-201ENSMUST00000122368 653 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm26402-201ENSMUST00000158499 113 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm22011-201ENSMUST00000158790 123 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm27733-201ENSMUST00000184803 68 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm18505-201ENSMUST00000187360 790 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm35857-201ENSMUST00000212739 178 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm26111-201ENSMUST00000083969 106 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm11576-201ENSMUST00000117433 417 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm15180-201ENSMUST00000117745 492 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm12793-201ENSMUST00000119268 292 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm25909-201ENSMUST00000157619 121 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm24853-201ENSMUST00000158026 121 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm23380-201ENSMUST00000158448 103 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Mir7116-201ENSMUST00000195956 70 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm44349-201ENSMUST00000197048 123 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm44223-201ENSMUST00000204854 114 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm19726-201ENSMUST00000205008 240 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm26129-201ENSMUST00000082719 107 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.47□□□□□ -1.69
Ddb1Q3U1J4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Ddb1Q3U1J4 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Ddb1Q3U1J4 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm22834-201ENSMUST00000102021 79 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm24374-201ENSMUST00000104394 106 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm15175-201ENSMUST00000117629 132 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm12294-201ENSMUST00000119723 490 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm14649-201ENSMUST00000121814 324 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm25373-201ENSMUST00000158156 115 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm22538-201ENSMUST00000158169 299 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm26214-201ENSMUST00000158581 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm24713-201ENSMUST00000178850 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm25448-201ENSMUST00000180065 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Mir6413-201ENSMUST00000184049 108 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Mir6363-201ENSMUST00000184880 114 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm29134-201ENSMUST00000186579 126 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm28241-201ENSMUST00000190916 235 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm18964-201ENSMUST00000193013 563 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm44016-201ENSMUST00000203463 164 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm8249-201ENSMUST00000219225 465 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm8274-201ENSMUST00000219820 463 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm26228-201ENSMUST00000082512 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm25080-201ENSMUST00000082526 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm25853-201ENSMUST00000082793 132 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm25518-201ENSMUST00000083864 107 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm3867-201ENSMUST00000086108 279 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ddb1Q3U1J4 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.45□□□□□ -1.7
Ddb1Q3U1J4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms