Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm12458-201ENSMUST00000119387 495 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm15377-201ENSMUST00000119594 246 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm14926-201ENSMUST00000120650 508 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm26149-201ENSMUST00000157432 108 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm23098-201ENSMUST00000157552 299 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm22337-201ENSMUST00000157721 132 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm24675-201ENSMUST00000158757 259 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm29668-201ENSMUST00000187802 315 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm37692-201ENSMUST00000192633 232 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm44720-201ENSMUST00000206076 260 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm45002-201ENSMUST00000208045 120 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm45796-201ENSMUST00000212483 114 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm35857-201ENSMUST00000212739 178 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm25755-201ENSMUST00000083396 107 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Mir471-201ENSMUST00000093596 67 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.77□□□□□ -1.81
Col8a1Q00780 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm25168-201ENSMUST00000104189 132 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm24605-201ENSMUST00000104772 96 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm16032-201ENSMUST00000118534 168 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm12379-201ENSMUST00000119607 391 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm12495-201ENSMUST00000119750 447 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm14516-201ENSMUST00000120012 252 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm27926-201ENSMUST00000157180 66 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm25390-201ENSMUST00000157341 103 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm24314-201ENSMUST00000158274 123 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm24168-201ENSMUST00000178825 107 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm36934-201ENSMUST00000192007 306 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 AL627387.1-201ENSMUST00000226063 250 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm22828-201ENSMUST00000083768 107 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col8a1Q00780 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Col8a1Q00780 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.76□□□□□ -1.81
Col8a1Q00780 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Mir690-201ENSMUST00000102110 109 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm25727-201ENSMUST00000104522 131 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm14971-201ENSMUST00000117980 663 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm12417-201ENSMUST00000119153 403 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm14877-201ENSMUST00000119803 478 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm22145-201ENSMUST00000157396 148 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm22257-201ENSMUST00000158687 301 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm26501-201ENSMUST00000178307 107 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Mir6346-201ENSMUST00000183982 81 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm29610-201ENSMUST00000187749 453 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm29140-201ENSMUST00000190187 476 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm28267-201ENSMUST00000191093 265 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm8242-202ENSMUST00000193056 475 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm44376-201ENSMUST00000197570 128 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm7407-201ENSMUST00000208301 568 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm45296-201ENSMUST00000209625 205 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.75□□□□□ -1.81
Col8a1Q00780 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms