Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm23028-201ENSMUST00000158773 265 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm19641-201ENSMUST00000188432 417 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Gm44657-201ENSMUST00000208568 450 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm45312-201ENSMUST00000210566 311 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm2628-201ENSMUST00000218019 426 ntBASIC3.19□□□□□ -1.9
Msx3P70354 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.19□□□□□ -1.9
Msx3P70354 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.19□□□□□ -1.9
Msx3P70354 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm22508-201ENSMUST00000082772 110 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Gm23848-201ENSMUST00000083826 106 ntBASIC3.19□□□□□ -1.9
Msx3P70354 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
Msx3P70354 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Msx3P70354 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Msx3P70354 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msx3P70354 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Msx3P70354 Gm23609-201ENSMUST00000104542 127 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Msx3P70354 Gm8217-201ENSMUST00000119136 465 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm12458-201ENSMUST00000119387 495 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm11785-201ENSMUST00000120165 601 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm15799-201ENSMUST00000120899 289 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm25391-201ENSMUST00000157342 134 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm22597-201ENSMUST00000157602 80 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm23078-201ENSMUST00000157848 148 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm20698-201ENSMUST00000175657 233 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm28534-201ENSMUST00000187744 676 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm37743-201ENSMUST00000194645 376 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm19089-201ENSMUST00000197207 613 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm18982-201ENSMUST00000198118 529 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Gm45387-201ENSMUST00000209792 632 ntBASIC3.18□□□□□ -1.9
Msx3P70354 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msx3P70354 Gm23738-201ENSMUST00000082828 171 ntBASIC3.18□□□□□ -1.9
Msx3P70354 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Msx3P70354 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msx3P70354 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msx3P70354 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msx3P70354 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msx3P70354 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Msx3P70354 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Msx3P70354 Gm7853-201ENSMUST00000100708 478 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm22771-201ENSMUST00000104449 91 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm12225-201ENSMUST00000117995 298 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm15936-201ENSMUST00000118706 460 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm22026-201ENSMUST00000122735 281 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.17□□□□□ -1.9
Msx3P70354 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.17□□□□□ -1.9
Msx3P70354 Gm26041-201ENSMUST00000158148 108 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
Msx3P70354 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Msx3P70354 Gm25361-201ENSMUST00000179358 76 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Gm43746-201ENSMUST00000200028 317 ntBASIC3.17□□□□□ -1.9
Msx3P70354 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.17□□□□□ -1.9
Msx3P70354 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.17□□□□□ -1.9
Msx3P70354 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Msx3P70354 Gm23741-201ENSMUST00000097237 171 ntBASIC3.17□□□□□ -1.9
Msx3P70354 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Msx3P70354 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Msx3P70354 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Msx3P70354 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Msx3P70354 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Msx3P70354 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Msx3P70354 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Msx3P70354 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Msx3P70354 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Msx3P70354 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Msx3P70354 Gm24119-201ENSMUST00000103979 246 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm6274-201ENSMUST00000118173 797 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm8858-201ENSMUST00000118259 342 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm14739-201ENSMUST00000120424 802 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm23886-201ENSMUST00000122684 313 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm4479-201ENSMUST00000178807 171 ntBASIC3.16□□□□□ -1.9
Msx3P70354 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Msx3P70354 Gm27520-201ENSMUST00000184872 81 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Mir6975-201ENSMUST00000184879 61 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm18185-201ENSMUST00000186725 667 ntBASIC3.16□□□□□ -1.9
Msx3P70354 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.16□□□□□ -1.9
Msx3P70354 Gm37085-201ENSMUST00000193780 196 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms