Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm44076-201ENSMUST00000203072 520 ntBASIC2.44□□□□□ -2.02
Cux1P53564 Gm44609-201ENSMUST00000207157 460 ntBASIC2.44□□□□□ -2.02
Cux1P53564 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.44□□□□□ -2.02
Cux1P53564 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.44□□□□□ -2.02
Cux1P53564 Gm10088-201ENSMUST00000074116 423 ntBASIC2.44□□□□□ -2.02
Cux1P53564 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cux1P53564 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cux1P53564 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.43□□□□□ -2.02
Cux1P53564 Gm12401-201ENSMUST00000118435 228 ntBASIC2.43□□□□□ -2.02
Cux1P53564 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.43□□□□□ -2.02
Cux1P53564 Gm22665-201ENSMUST00000158720 275 ntBASIC2.43□□□□□ -2.02
Cux1P53564 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Cux1P53564 Gm44266-201ENSMUST00000205235 500 ntBASIC2.43□□□□□ -2.02
Cux1P53564 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC2.43□□□□□ -2.02
Cux1P53564 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.43□□□□□ -2.02
Cux1P53564 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.43□□□□□ -2.02
Cux1P53564 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.43□□□□□ -2.02
Cux1P53564 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.43□□□□□ -2.02
Cux1P53564 Gm15526-201ENSMUST00000112504 204 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm12880-201ENSMUST00000120652 494 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.42□□□□□ -2.02
Cux1P53564 Mir6393-201ENSMUST00000183709 94 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm27668-201ENSMUST00000184188 120 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm28200-201ENSMUST00000187778 315 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm29378-201ENSMUST00000188723 315 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm28909-201ENSMUST00000189406 315 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Cux1P53564 AC142113.2-201ENSMUST00000217425 748 ntBASIC2.42□□□□□ -2.02
Cux1P53564 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.42□□□□□ -2.02
Cux1P53564 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.42□□□□□ -2.02
Cux1P53564 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cux1P53564 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Cux1P53564 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cux1P53564 Gm23455-201ENSMUST00000083331 100 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm11843-201ENSMUST00000118984 425 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.42□□□□□ -2.02
Cux1P53564 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.42□□□□□ -2.02
Cux1P53564 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cux1P53564 Gm25198-201ENSMUST00000178574 110 ntBASIC2.41□□□□□ -2.02
Cux1P53564 Gm42625-201ENSMUST00000198611 922 ntBASIC2.41□□□□□ -2.02
Cux1P53564 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cux1P53564 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cux1P53564 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cux1P53564 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cux1P53564 Gm11357-201ENSMUST00000119758 954 ntBASIC2.4□□□□□ -2.03
Cux1P53564 Gm12383-201ENSMUST00000120628 760 ntBASIC2.4□□□□□ -2.03
Cux1P53564 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.4□□□□□ -2.03
Cux1P53564 Gm24770-201ENSMUST00000158505 92 ntBASIC2.4□□□□□ -2.03
Cux1P53564 Gm27493-201ENSMUST00000184128 78 ntBASIC2.4□□□□□ -2.03
Cux1P53564 Gm19177-201ENSMUST00000204520 613 ntBASIC2.4□□□□□ -2.03
Cux1P53564 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.4□□□□□ -2.03
Cux1P53564 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.4□□□□□ -2.03
Cux1P53564 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.39□□□□□ -2.03
Cux1P53564 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.39□□□□□ -2.03
Cux1P53564 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cux1P53564 Gm22026-201ENSMUST00000122735 281 ntBASIC2.39□□□□□ -2.03
Cux1P53564 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Cux1P53564 Gm26652-202ENSMUST00000181672 475 ntBASIC2.39□□□□□ -2.03
Cux1P53564 Gm9022-202ENSMUST00000183285 483 ntBASIC2.39□□□□□ -2.03
Cux1P53564 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cux1P53564 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.39□□□□□ -2.03
Cux1P53564 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.39□□□□□ -2.03
Cux1P53564 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cux1P53564 Gm14537-201ENSMUST00000117464 599 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm23033-201ENSMUST00000157996 134 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm25044-201ENSMUST00000158603 104 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm2855-201ENSMUST00000166765 456 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.38□□□□□ -2.03
Cux1P53564 Gm35931-201ENSMUST00000203931 448 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm19244-201ENSMUST00000204340 253 ntBASIC2.38□□□□□ -2.03
Cux1P53564 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cux1P53564 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cux1P53564 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cux1P53564 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm8532-201ENSMUST00000179174 461 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm23407-201ENSMUST00000082538 91 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Mir200b-201ENSMUST00000083615 70 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cux1P53564 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm26301-201ENSMUST00000104813 95 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm13210-201ENSMUST00000121483 273 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm23558-201ENSMUST00000157823 80 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.37□□□□□ -2.03
Cux1P53564 Gm43115-201ENSMUST00000196244 160 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Gm19563-201ENSMUST00000222031 270 ntBASIC2.37□□□□□ -2.03
Cux1P53564 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cux1P53564 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.37□□□□□ -2.03
Cux1P53564 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Cux1P53564 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms