Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm13518-201ENSMUST00000120018 233 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm15799-201ENSMUST00000120899 289 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm11849-201ENSMUST00000121293 261 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm16358-201ENSMUST00000146046 210 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm23781-201ENSMUST00000157940 308 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm7953-201ENSMUST00000168278 469 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm27402-201ENSMUST00000183890 120 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Mir7047-201ENSMUST00000184595 64 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm27694-201ENSMUST00000184740 86 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm28654-201ENSMUST00000189801 379 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm43814-201ENSMUST00000197851 413 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm34779-201ENSMUST00000210036 263 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm23412-201ENSMUST00000083017 107 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm23677-201ENSMUST00000083156 104 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Shmt1P50431 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Shmt1P50431 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Shmt1P50431 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Shmt1P50431 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm12568-201ENSMUST00000117362 624 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm15783-201ENSMUST00000117521 633 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm11794-201ENSMUST00000119446 237 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.06□□□□□ -1.76
Shmt1P50431 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm12226-201ENSMUST00000144172 876 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm22059-201ENSMUST00000157544 104 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm23779-201ENSMUST00000157938 64 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm22769-201ENSMUST00000158367 98 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm23312-201ENSMUST00000158774 102 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm26189-201ENSMUST00000179879 107 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm27189-201ENSMUST00000184119 190 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm5368-201ENSMUST00000189012 589 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm36934-201ENSMUST00000192007 306 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm37692-201ENSMUST00000192633 232 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm3010-201ENSMUST00000198805 448 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm43393-201ENSMUST00000200147 194 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Mir7227-201ENSMUST00000200408 59 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm45006-201ENSMUST00000206078 690 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm7726-201ENSMUST00000206241 231 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.06□□□□□ -1.76
Shmt1P50431 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm9318-201ENSMUST00000222444 438 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm22577-201ENSMUST00000083731 109 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Olfr713-201ENSMUST00000098139 975 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Shmt1P50431 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.06□□□□□ -1.76
Shmt1P50431 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Shmt1P50431 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Shmt1P50431 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm14013-201ENSMUST00000119006 270 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm12156-201ENSMUST00000119188 554 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm11388-201ENSMUST00000120908 159 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm14287-201ENSMUST00000121060 117 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.05□□□□□ -1.76
Shmt1P50431 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm26102-201ENSMUST00000157251 284 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm22843-201ENSMUST00000157710 134 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm23084-201ENSMUST00000157850 114 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm26622-201ENSMUST00000180520 298 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm29350-201ENSMUST00000189141 541 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm43739-201ENSMUST00000198294 307 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm42665-201ENSMUST00000202100 586 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.05□□□□□ -1.76
Shmt1P50431 Gm7540-201ENSMUST00000219764 926 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.05□□□□□ -1.76
Shmt1P50431 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm9309-201ENSMUST00000223537 546 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Shmt1P50431 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Shmt1P50431 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Shmt1P50431 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms