Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25534-201ENSMUST00000175365 125 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Gm20698-201ENSMUST00000175657 233 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Gm29397-201ENSMUST00000185205 333 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.12□□□□□ -1.59
Rfx1P48377 Gm29704-201ENSMUST00000196011 253 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Rfx1P48377 Mir27a-201ENSMUST00000083510 87 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
Rfx1P48377 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Gm37742-201ENSMUST00000193263 3979 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 AC153150.1-201ENSMUST00000226065 3782 ntBASIC5.12□□□□□ -1.59
Rfx1P48377 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rfx1P48377 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC5.12□□□□□ -1.59
Rfx1P48377 Gm37792-201ENSMUST00000195761 3413 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rfx1P48377 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm23594-201ENSMUST00000104307 134 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm14825-201ENSMUST00000113538 701 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm14298-201ENSMUST00000139032 237 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm16356-201ENSMUST00000143300 169 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm6265-201ENSMUST00000149263 231 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm26101-201ENSMUST00000157246 105 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm22870-201ENSMUST00000157501 112 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rfx1P48377 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rfx1P48377 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm43286-201ENSMUST00000197420 424 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm43529-201ENSMUST00000199178 412 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm19177-201ENSMUST00000204520 613 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm44030-201ENSMUST00000204865 432 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm44513-201ENSMUST00000206811 439 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Gm45860-201ENSMUST00000212700 334 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Rfx1P48377 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.11□□□□□ -1.59
Rfx1P48377 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rfx1P48377 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Rfx1P48377 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm6058-201ENSMUST00000154261 399 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm25956-201ENSMUST00000175115 217 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm27896-201ENSMUST00000175162 317 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm26983-201ENSMUST00000182051 388 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm37050-201ENSMUST00000193464 466 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm42925-201ENSMUST00000197359 285 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm21032-201ENSMUST00000208108 2578 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Gm45499-201ENSMUST00000211656 280 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm22220-201ENSMUST00000082671 149 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.1□□□□□ -1.59
Rfx1P48377 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rfx1P48377 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rfx1P48377 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rfx1P48377 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Rfx1P48377 Gm10484-201ENSMUST00000196372 4759 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.09□□□□□ -1.59
Rfx1P48377 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rfx1P48377 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rfx1P48377 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Mir92b-201ENSMUST00000102300 83 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm22472-201ENSMUST00000104115 134 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm23322-201ENSMUST00000104464 167 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm15670-201ENSMUST00000117740 447 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm15994-201ENSMUST00000118029 402 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm22514-201ENSMUST00000122547 308 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm24839-201ENSMUST00000122602 107 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm24720-201ENSMUST00000157518 166 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm27999-201ENSMUST00000183539 193 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm38332-201ENSMUST00000194189 147 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm9402-201ENSMUST00000196849 388 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm45005-201ENSMUST00000206640 157 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Gm45513-201ENSMUST00000210228 376 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.09□□□□□ -1.59
Rfx1P48377 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms