Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm30341-201ENSMUST00000194363 289 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.46□□□□□ -1.86
Traf1P39428 Gm24350-202ENSMUST00000198309 132 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm44212-201ENSMUST00000205016 897 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm18414-201ENSMUST00000210858 694 ntBASIC3.46□□□□□ -1.86
Traf1P39428 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm26055-201ENSMUST00000083038 107 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm25755-201ENSMUST00000083396 107 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Traf1P39428 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Traf1P39428 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Traf1P39428 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Traf1P39428 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.45□□□□□ -1.86
Traf1P39428 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Traf1P39428 Gm22072-201ENSMUST00000116850 121 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm13329-201ENSMUST00000117063 265 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm15282-201ENSMUST00000117707 300 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm14292-201ENSMUST00000118761 456 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm14694-201ENSMUST00000121856 282 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm13424-201ENSMUST00000122301 354 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm23118-201ENSMUST00000122657 187 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm12238-201ENSMUST00000127764 124 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm24241-201ENSMUST00000157787 145 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm26195-201ENSMUST00000175035 101 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm20698-201ENSMUST00000175657 233 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm24897-201ENSMUST00000179033 107 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
Traf1P39428 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Traf1P39428 Gm27698-201ENSMUST00000184060 249 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm28282-201ENSMUST00000186072 186 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm37946-201ENSMUST00000192064 347 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.45□□□□□ -1.86
Traf1P39428 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.45□□□□□ -1.86
Traf1P39428 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Gm7984-201ENSMUST00000060640 538 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Traf1P39428 Gm24921-201ENSMUST00000083024 107 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Traf1P39428 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Traf1P39428 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.45□□□□□ -1.86
Traf1P39428 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Traf1P39428 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Traf1P39428 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Traf1P39428 Gm14918-201ENSMUST00000118153 268 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm15113-201ENSMUST00000119280 836 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm11384-201ENSMUST00000121376 303 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm12045-201ENSMUST00000122122 573 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm12368-201ENSMUST00000122251 434 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.44□□□□□ -1.86
Traf1P39428 Gm25283-201ENSMUST00000157272 77 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm24532-201ENSMUST00000157951 286 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm24958-201ENSMUST00000158009 97 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Gm5967-201ENSMUST00000172723 494 ntBASIC3.44□□□□□ -1.86
Traf1P39428 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Gm38044-201ENSMUST00000192964 487 ntBASIC3.44□□□□□ -1.86
Traf1P39428 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.44□□□□□ -1.86
Traf1P39428 Gm44041-201ENSMUST00000203678 396 ntBASIC3.44□□□□□ -1.86
Traf1P39428 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Traf1P39428 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Traf1P39428 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Traf1P39428 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.44□□□□□ -1.86
Traf1P39428 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Traf1P39428 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Traf1P39428 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Traf1P39428 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Traf1P39428 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Traf1P39428 Gm7853-201ENSMUST00000100708 478 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm24430-201ENSMUST00000104077 104 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm12102-201ENSMUST00000118251 604 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm11356-201ENSMUST00000118974 192 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm15112-201ENSMUST00000120152 860 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm11819-201ENSMUST00000122192 372 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm24959-201ENSMUST00000157924 146 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm26041-201ENSMUST00000158148 108 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm21758-201ENSMUST00000179336 819 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm29647-201ENSMUST00000188795 666 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm20832-201ENSMUST00000189076 665 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm28241-201ENSMUST00000190916 235 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm28504-201ENSMUST00000190977 666 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm31511-201ENSMUST00000193134 657 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm35843-201ENSMUST00000193716 666 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 Gm30638-201ENSMUST00000195570 656 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Gm36728-201ENSMUST00000195782 665 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.43□□□□□ -1.86
Traf1P39428 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms