Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Msx1P13297 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Msx1P13297 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Msx1P13297 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Msx1P13297 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.88□□□□□ -1.63
Msx1P13297 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.88□□□□□ -1.63
Msx1P13297 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Msx1P13297 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Msx1P13297 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Msx1P13297 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Msx1P13297 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Msx1P13297 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm25418-201ENSMUST00000104214 129 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Gm7909-201ENSMUST00000182688 614 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Gm27875-201ENSMUST00000184425 123 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm38270-201ENSMUST00000192721 407 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Msx1P13297 Mir21a-201ENSMUST00000083521 92 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.87□□□□□ -1.63
Msx1P13297 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Msx1P13297 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Msx1P13297 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Msx1P13297 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Gm24125-201ENSMUST00000104105 137 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm24170-201ENSMUST00000104124 133 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm24350-201ENSMUST00000104163 133 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Mir1193-201ENSMUST00000116761 121 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm15493-201ENSMUST00000119461 528 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm12238-201ENSMUST00000127764 124 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm23171-201ENSMUST00000157159 264 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm23743-201ENSMUST00000157389 274 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Mir3104-201ENSMUST00000174911 63 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Gm23415-201ENSMUST00000175519 83 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Gm7422-201ENSMUST00000220115 640 ntBASIC4.86□□□□□ -1.63
Msx1P13297 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 Gm24611-201ENSMUST00000083272 107 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Msx1P13297 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.86□□□□□ -1.63
Msx1P13297 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Msx1P13297 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Msx1P13297 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Msx1P13297 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Msx1P13297 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Msx1P13297 Gm22020-201ENSMUST00000104358 136 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm14073-201ENSMUST00000117344 381 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm15148-201ENSMUST00000117602 156 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm15282-201ENSMUST00000117707 300 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Gm23534-201ENSMUST00000157539 97 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm23641-201ENSMUST00000157857 101 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm22966-201ENSMUST00000157957 129 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Msx1P13297 Gm21850-201ENSMUST00000179792 359 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm36259-201ENSMUST00000197340 392 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm6240-201ENSMUST00000208014 473 ntBASIC4.85□□□□□ -1.63
Msx1P13297 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm23927-201ENSMUST00000082466 215 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm22826-201ENSMUST00000083774 165 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Gm25257-201ENSMUST00000083907 110 ntBASIC4.85□□□□□ -1.63
Msx1P13297 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms