Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm12793-201ENSMUST00000119268 292 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm12685-201ENSMUST00000121702 214 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Mir7012-201ENSMUST00000183900 64 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm45422-201ENSMUST00000211476 246 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd3P09027 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd3P09027 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Smc5-206ENSMUST00000226111 3265 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd3P09027 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd3P09027 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.04□□□□□ -1.76
Hoxd3P09027 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Mdga2-203ENSMUST00000113942 423 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm12422-201ENSMUST00000121431 302 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm13077-201ENSMUST00000121941 484 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm23993-201ENSMUST00000157478 144 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm22966-201ENSMUST00000157957 129 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm23546-201ENSMUST00000158211 137 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm25865-201ENSMUST00000158247 104 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm24636-201ENSMUST00000158673 288 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Mir3062-201ENSMUST00000174986 105 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm22741-201ENSMUST00000083438 165 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Hoxd3P09027 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.03□□□□□ -1.76
Hoxd3P09027 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd3P09027 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm14067-201ENSMUST00000119340 314 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm22213-201ENSMUST00000157564 119 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm23965-201ENSMUST00000157969 142 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm5967-201ENSMUST00000172723 494 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm5777-201ENSMUST00000177265 448 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm44871-201ENSMUST00000207821 497 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm24966-201ENSMUST00000082443 79 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.02□□□□□ -1.77
Hoxd3P09027 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hoxd3P09027 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Hoxd3P09027 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Hoxd3P09027 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm24477-201ENSMUST00000157438 103 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm25383-201ENSMUST00000157810 144 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm24054-201ENSMUST00000158619 105 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm22139-201ENSMUST00000158747 105 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Hoxd3P09027 Mir5103-201ENSMUST00000175111 79 ntBASIC4.01□□□□□ -1.77
Hoxd3P09027 Gm22355-201ENSMUST00000175531 96 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 362.9 ms