Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm27624-201ENSMUST00000185047 177 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm29330-201ENSMUST00000190032 699 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm30280-201ENSMUST00000192214 262 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm44543-201ENSMUST00000209136 396 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm45616-201ENSMUST00000211711 319 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm33654-201ENSMUST00000221704 215 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Gm21937-201ENSMUST00000222825 218 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Vti1aO89116 Gm23510-201ENSMUST00000083083 163 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Vti1aO89116 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vti1aO89116 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.61□□□□□ -1.67
Vti1aO89116 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Gm10552-201ENSMUST00000113396 372 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm14537-201ENSMUST00000117464 599 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.6□□□□□ -1.67
Vti1aO89116 Gm27245-201ENSMUST00000184385 376 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm9722-201ENSMUST00000194568 802 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.6□□□□□ -1.67
Vti1aO89116 Gm19202-201ENSMUST00000198096 808 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm43739-201ENSMUST00000198294 307 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Snord14e-201ENSMUST00000082857 90 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm25410-201ENSMUST00000083758 137 ntBASIC4.6□□□□□ -1.67
Vti1aO89116 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Vti1aO89116 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vti1aO89116 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1aO89116 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Vti1aO89116 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Vti1aO89116 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1aO89116 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
Vti1aO89116 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm12191-201ENSMUST00000118307 348 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm15553-201ENSMUST00000118757 430 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm9703-201ENSMUST00000119573 343 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm11448-201ENSMUST00000120427 450 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm25177-201ENSMUST00000122634 117 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm25341-201ENSMUST00000157461 268 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm23581-201ENSMUST00000158531 63 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm22435-201ENSMUST00000158552 128 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm16232-201ENSMUST00000162856 167 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm22859-201ENSMUST00000174978 122 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm23141-201ENSMUST00000178682 94 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm19498-201ENSMUST00000191128 331 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm8790-201ENSMUST00000194108 322 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Vti1aO89116 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1aO89116 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm3086-202ENSMUST00000221248 310 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1aO89116 Gm23721-201ENSMUST00000083005 107 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 Gm10343-201ENSMUST00000096279 348 ntBASIC4.59□□□□□ -1.67
Vti1aO89116 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.59□□□□□ -1.68
Vti1aO89116 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Vti1aO89116 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC4.58□□□□□ -1.68
Vti1aO89116 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vti1aO89116 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vti1aO89116 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1aO89116 Gm23063-201ENSMUST00000102350 93 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Vti1aO89116 Gm13550-201ENSMUST00000118185 525 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm14861-201ENSMUST00000119451 455 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm11693-201ENSMUST00000119625 565 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm12087-201ENSMUST00000121878 258 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.58□□□□□ -1.68
Vti1aO89116 Gm25999-201ENSMUST00000175398 133 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm23415-201ENSMUST00000175519 83 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm27410-201ENSMUST00000183851 115 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm37715-201ENSMUST00000193206 235 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm37029-201ENSMUST00000195773 239 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm43586-201ENSMUST00000195948 310 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm44032-201ENSMUST00000204841 166 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm19726-201ENSMUST00000205008 240 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Gm45539-201ENSMUST00000210313 428 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1aO89116 Gm4987-201ENSMUST00000078326 408 ntBASIC4.58□□□□□ -1.68
Vti1aO89116 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vti1aO89116 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vti1aO89116 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1aO89116 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Vti1aO89116 Gm12982-201ENSMUST00000117408 190 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms