Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm29704-201ENSMUST00000196011 253 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Gm44355-201ENSMUST00000200417 104 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cbx4O55187 Gm8785-201ENSMUST00000220259 487 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cbx4O55187 Gm3867-201ENSMUST00000086108 279 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cbx4O55187 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cbx4O55187 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cbx4O55187 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cbx4O55187 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cbx4O55187 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm9157-201ENSMUST00000117673 225 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm9043-201ENSMUST00000119677 314 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm15799-201ENSMUST00000120899 289 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm11582-201ENSMUST00000121041 236 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm12693-201ENSMUST00000121965 483 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm25970-201ENSMUST00000157165 86 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm24553-201ENSMUST00000158653 131 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm23152-201ENSMUST00000175322 116 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm25314-201ENSMUST00000178810 79 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Mir6408-201ENSMUST00000183643 91 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm21673-201ENSMUST00000186640 436 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm21135-201ENSMUST00000189023 436 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm32447-201ENSMUST00000194265 697 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm44149-201ENSMUST00000204256 226 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm44961-201ENSMUST00000207450 196 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.39□□□□□ -1.87
Cbx4O55187 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm35405-201ENSMUST00000218754 400 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.39□□□□□ -1.87
Cbx4O55187 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cbx4O55187 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cbx4O55187 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cbx4O55187 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.39□□□□□ -1.87
Cbx4O55187 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm23256-201ENSMUST00000102235 110 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm26140-201ENSMUST00000103807 110 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm24889-201ENSMUST00000104388 132 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm15399-201ENSMUST00000118055 724 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm12806-201ENSMUST00000119384 268 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm12458-201ENSMUST00000119387 495 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm25967-201ENSMUST00000157168 147 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm23755-201ENSMUST00000157578 343 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm22849-201ENSMUST00000157713 307 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm25977-201ENSMUST00000158697 85 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm24876-201ENSMUST00000158780 92 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm24810-201ENSMUST00000175317 70 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm22908-201ENSMUST00000177620 110 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm27599-201ENSMUST00000183758 174 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Mir7658-201ENSMUST00000184043 57 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm27490-201ENSMUST00000184754 128 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm45245-201ENSMUST00000210082 376 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 AC161426.1-201ENSMUST00000214137 286 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.38□□□□□ -1.87
Cbx4O55187 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.38□□□□□ -1.87
Cbx4O55187 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Cbx4O55187 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cbx4O55187 Gm23925-201ENSMUST00000082471 132 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Gm4017-201ENSMUST00000084813 338 ntBASIC3.38□□□□□ -1.87
Cbx4O55187 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cbx4O55187 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Cbx4O55187 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms