Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm23767-201ENSMUST00000179278 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24153-201ENSMUST00000179280 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm25597-201ENSMUST00000179388 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm25816-201ENSMUST00000179764 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26188-201ENSMUST00000179963 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26433-201ENSMUST00000180227 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm22128-201ENSMUST00000180346 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm7329-201ENSMUST00000185915 210 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm29335-201ENSMUST00000188361 459 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Ighv8-1-201ENSMUST00000194897 291 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm6991-201ENSMUST00000218475 1178 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Mir30d-201ENSMUST00000083503 82 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Hmgb3O54879 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm14125-201ENSMUST00000113442 680 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm22151-201ENSMUST00000116963 58 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm25292-201ENSMUST00000122797 322 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.73□□□□□ -2.13
Hmgb3O54879 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm24968-201ENSMUST00000179817 107 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm27379-201ENSMUST00000183730 123 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm28399-201ENSMUST00000186221 318 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm28572-201ENSMUST00000187444 318 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm29184-201ENSMUST00000190038 334 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm37098-201ENSMUST00000192290 244 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm43804-201ENSMUST00000198280 456 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm19252-201ENSMUST00000204705 305 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm18000-201ENSMUST00000212153 800 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm5374-201ENSMUST00000222868 657 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 AC154730.1-201ENSMUST00000227874 816 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm23939-201ENSMUST00000082880 133 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Gm23932-201ENSMUST00000082914 107 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Mir93-201ENSMUST00000083593 88 ntBASIC1.73□□□□□ -2.13
Hmgb3O54879 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Hmgb3O54879 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm15025-201ENSMUST00000118434 418 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm22755-201ENSMUST00000157143 100 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm23559-201ENSMUST00000157824 103 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm24534-201ENSMUST00000157949 291 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm25490-201ENSMUST00000158734 130 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm22093-201ENSMUST00000158980 111 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Hmgb3O54879 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Mir6372-201ENSMUST00000185114 109 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm29492-201ENSMUST00000187124 457 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm6651-201ENSMUST00000189471 271 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm37576-201ENSMUST00000194228 372 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm44083-201ENSMUST00000203114 337 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm44865-201ENSMUST00000207240 531 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm46436-201ENSMUST00000221851 1294 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.72□□□□□ -2.13
Hmgb3O54879 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Hmgb3O54879 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Hmgb3O54879 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm13359-201ENSMUST00000119000 695 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm26101-201ENSMUST00000157246 105 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm22483-201ENSMUST00000157986 274 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm26000-201ENSMUST00000157991 107 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm22727-201ENSMUST00000158090 116 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm8580-201ENSMUST00000160295 464 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm24417-201ENSMUST00000178123 79 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm24653-201ENSMUST00000178541 79 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm25934-201ENSMUST00000178642 79 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm21638-201ENSMUST00000179473 836 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm27505-201ENSMUST00000185071 110 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms