Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm22480-201ENSMUST00000122568 128 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm23579-201ENSMUST00000158528 103 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm22890-201ENSMUST00000158642 144 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm25671-201ENSMUST00000178612 105 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm23307-201ENSMUST00000179167 105 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm25286-201ENSMUST00000179790 105 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm23523-201ENSMUST00000180190 107 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm26622-201ENSMUST00000180520 298 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm27695-201ENSMUST00000184301 91 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm28058-201ENSMUST00000186421 264 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm28623-201ENSMUST00000187219 192 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm43604-201ENSMUST00000199799 705 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm44041-201ENSMUST00000203678 396 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm19126-201ENSMUST00000207896 509 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm18462-201ENSMUST00000208112 417 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 AF357341-201ENSMUST00000083088 75 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Shisa8J3QNX5 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm25765-201ENSMUST00000104100 132 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Mir743b-201ENSMUST00000104751 77 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm14897-201ENSMUST00000118213 207 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm13409-201ENSMUST00000122072 546 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm22789-201ENSMUST00000157884 130 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm25436-201ENSMUST00000158275 145 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm10067-201ENSMUST00000179462 348 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm28995-201ENSMUST00000186625 261 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm29350-201ENSMUST00000189141 541 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm37313-201ENSMUST00000191673 290 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm38270-201ENSMUST00000192721 407 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm8790-201ENSMUST00000194108 322 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm19243-201ENSMUST00000198592 269 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm43440-201ENSMUST00000201957 729 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm43039-201ENSMUST00000202883 963 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm45162-201ENSMUST00000209013 618 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm45434-201ENSMUST00000210550 293 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm2059-201ENSMUST00000212025 287 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm8942-201ENSMUST00000217892 400 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm17829-201ENSMUST00000219782 344 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm19326-201ENSMUST00000219818 326 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm25755-201ENSMUST00000083396 107 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm24522-201ENSMUST00000083964 108 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Shisa8J3QNX5 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14823-201ENSMUST00000117698 238 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm13510-201ENSMUST00000118659 429 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14647-201ENSMUST00000119392 680 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14881-201ENSMUST00000120366 372 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14037-201ENSMUST00000120576 313 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm11582-201ENSMUST00000121041 236 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm11849-201ENSMUST00000121293 261 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm24244-201ENSMUST00000157317 130 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm24876-201ENSMUST00000158780 92 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm26362-201ENSMUST00000158865 315 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm22501-201ENSMUST00000158981 127 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm23977-201ENSMUST00000177871 74 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms