Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
BC048679D3YXE9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BC048679D3YXE9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BC048679D3YXE9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.54□□□□□ -2
BC048679D3YXE9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.54□□□□□ -2
BC048679D3YXE9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm22658-201ENSMUST00000104196 155 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm13614-201ENSMUST00000117306 503 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm12370-201ENSMUST00000117809 604 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm14292-201ENSMUST00000118761 456 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm13751-201ENSMUST00000120280 752 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm14915-201ENSMUST00000120747 204 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm22957-201ENSMUST00000122511 123 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm24998-201ENSMUST00000157908 89 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm21754-201ENSMUST00000177550 479 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Spin2g-201ENSMUST00000178425 687 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm24968-201ENSMUST00000179817 107 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm27796-201ENSMUST00000183863 261 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm27893-201ENSMUST00000184408 194 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm28283-201ENSMUST00000185509 178 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm37097-201ENSMUST00000193676 336 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm19457-201ENSMUST00000200995 448 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm43899-201ENSMUST00000203675 246 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm45245-201ENSMUST00000210082 376 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm3442-201ENSMUST00000216808 710 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm7753-201ENSMUST00000221007 867 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Rny3-201ENSMUST00000083011 102 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Mir19a-201ENSMUST00000083482 82 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
BC048679D3YXE9 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.54□□□□□ -2
BC048679D3YXE9 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.54□□□□□ -2
BC048679D3YXE9 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BC048679D3YXE9 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BC048679D3YXE9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.53□□□□□ -2
BC048679D3YXE9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm6923-201ENSMUST00000118343 406 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm22755-201ENSMUST00000157143 100 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm25365-201ENSMUST00000158852 121 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm25163-201ENSMUST00000158905 104 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Mir6341-201ENSMUST00000183490 121 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm27698-201ENSMUST00000184060 249 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm29602-201ENSMUST00000186887 442 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm28414-201ENSMUST00000190111 294 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm17966-201ENSMUST00000193453 594 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.53□□□□□ -2
BC048679D3YXE9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm5551-201ENSMUST00000199720 690 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm44520-201ENSMUST00000205447 802 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm45049-201ENSMUST00000207586 591 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm9068-201ENSMUST00000217393 455 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm4921-201ENSMUST00000219804 992 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm17890-201ENSMUST00000221419 757 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.53□□□□□ -2
BC048679D3YXE9 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm10088-201ENSMUST00000074116 423 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BC048679D3YXE9 Gm26128-201ENSMUST00000083170 110 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Mir346-201ENSMUST00000083547 98 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Mir101b-201ENSMUST00000083622 97 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Gm10161-201ENSMUST00000091506 204 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.53□□□□□ -2
BC048679D3YXE9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BC048679D3YXE9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
BC048679D3YXE9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BC048679D3YXE9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms