Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir148b-201ENSMUST00000083626 97 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm13714-201ENSMUST00000117313 221 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm14008-201ENSMUST00000120483 274 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm12721-201ENSMUST00000120621 268 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm26371-201ENSMUST00000157829 104 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm25976-201ENSMUST00000158695 130 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm37428-201ENSMUST00000193886 137 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm37431-201ENSMUST00000195102 111 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Gm18747-201ENSMUST00000198129 648 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.43□□□□□ -2.18
Col6a4A2AX52 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm24342-201ENSMUST00000103907 104 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm22072-201ENSMUST00000116850 121 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm17065-201ENSMUST00000165245 239 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm18611-201ENSMUST00000200334 1118 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm44076-201ENSMUST00000203072 520 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm19177-201ENSMUST00000204520 613 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm45034-201ENSMUST00000206831 482 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Gm24611-201ENSMUST00000083272 107 ntBASIC1.42□□□□□ -2.18
Col6a4A2AX52 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a4A2AX52 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm13627-201ENSMUST00000119700 706 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm5937-201ENSMUST00000119715 643 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm13409-201ENSMUST00000122072 546 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm13487-201ENSMUST00000122240 864 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm25945-201ENSMUST00000122484 135 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm23441-201ENSMUST00000157268 127 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm28191-201ENSMUST00000189112 211 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm42465-201ENSMUST00000197036 492 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm26064-201ENSMUST00000083381 109 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm24715-201ENSMUST00000102377 95 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm22036-201ENSMUST00000157279 215 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm6788-201ENSMUST00000166459 270 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm17186-201ENSMUST00000171742 456 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm26652-202ENSMUST00000181672 475 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm27271-201ENSMUST00000183509 170 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm42438-201ENSMUST00000197832 974 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Gm25755-201ENSMUST00000083396 107 ntBASIC1.41□□□□□ -2.18
Col6a4A2AX52 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col6a4A2AX52 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm12401-201ENSMUST00000118435 228 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm12512-201ENSMUST00000119620 217 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm25341-201ENSMUST00000157461 268 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm17161-201ENSMUST00000169187 524 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm27477-201ENSMUST00000184649 143 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm28744-201ENSMUST00000189939 340 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm37778-201ENSMUST00000191732 190 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Mir7232-201ENSMUST00000197929 74 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Snora69-201ENSMUST00000083708 131 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Col6a4A2AX52 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.4□□□□□ -2.18
Col6a4A2AX52 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Col6a4A2AX52 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm12383-201ENSMUST00000120628 760 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm24965-201ENSMUST00000157922 106 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm25432-201ENSMUST00000158284 66 ntBASIC1.4□□□□□ -2.19
Col6a4A2AX52 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms