Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm24147-201ENSMUST00000082763 144 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Snord104-201ENSMUST00000083192 70 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23247-201ENSMUST00000083373 107 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25755-201ENSMUST00000083396 107 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm23733-201ENSMUST00000083750 106 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm25411-201ENSMUST00000083760 151 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm28359-201ENSMUST00000187470 1322 ntBASIC1.91□□□□□ -2.1
Trav11A0A0B4J1J9 Gm43665-201ENSMUST00000198672 1659 ntBASIC1.9□□□□□ -2.1
Trav11A0A0B4J1J9 Gm44625-201ENSMUST00000207838 1561 ntBASIC1.9□□□□□ -2.1
Trav11A0A0B4J1J9 Gm22270-201ENSMUST00000104034 132 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24340-201ENSMUST00000104208 97 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm13343-201ENSMUST00000116474 105 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Mir467h-201ENSMUST00000116759 121 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm13803-201ENSMUST00000117547 489 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm6274-201ENSMUST00000118173 797 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11285-201ENSMUST00000118443 322 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11813-201ENSMUST00000118586 291 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14901-201ENSMUST00000119001 283 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15760-201ENSMUST00000119553 283 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14989-201ENSMUST00000120497 207 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Defa-ps5-201ENSMUST00000121541 279 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm4540-201ENSMUST00000170669 429 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Snord93-201ENSMUST00000175580 71 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37568-201ENSMUST00000191755 364 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm29747-201ENSMUST00000194764 585 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm35570-201ENSMUST00000198730 681 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8041-201ENSMUST00000199755 616 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm26129-201ENSMUST00000082719 107 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24610-201ENSMUST00000083270 109 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.9□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25466-201ENSMUST00000103995 132 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14579-201ENSMUST00000117068 283 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14897-201ENSMUST00000118213 207 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12006-201ENSMUST00000120786 403 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8880-201ENSMUST00000121800 454 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11229-201ENSMUST00000121993 437 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25292-201ENSMUST00000122797 322 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm22186-201ENSMUST00000157822 122 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25334-201ENSMUST00000158036 110 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm8580-201ENSMUST00000160295 464 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm9071-201ENSMUST00000165915 474 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23933-201ENSMUST00000178405 79 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm27676-201ENSMUST00000183669 61 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm28591-201ENSMUST00000185259 183 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm3442-201ENSMUST00000216808 710 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 AC167721.1-201ENSMUST00000217088 279 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms