Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm14713-201ENSMUST00000122362 686 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm16129-201ENSMUST00000152628 486 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26101-201ENSMUST00000157246 105 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25557-201ENSMUST00000158084 315 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24681-201ENSMUST00000158760 107 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10177-202ENSMUST00000161698 207 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24757-201ENSMUST00000176987 371 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24925-201ENSMUST00000178157 107 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir7242-201ENSMUST00000183710 79 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm27582-201ENSMUST00000184084 126 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm27786-201ENSMUST00000184337 70 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm27520-201ENSMUST00000184872 81 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm7329-201ENSMUST00000185915 210 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm6060-201ENSMUST00000188671 251 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm37987-201ENSMUST00000194999 825 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm6615-201ENSMUST00000199426 631 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm19457-201ENSMUST00000200995 448 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm19649-201ENSMUST00000201126 822 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm44125-201ENSMUST00000203068 448 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm45860-201ENSMUST00000212700 334 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24446-201ENSMUST00000083982 156 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25539-201ENSMUST00000116886 122 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm14751-201ENSMUST00000117693 222 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm11460-201ENSMUST00000118200 361 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm13541-201ENSMUST00000119519 283 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm14411-201ENSMUST00000121798 914 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 DQ267100-201ENSMUST00000122600 72 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm23033-201ENSMUST00000157996 134 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24879-201ENSMUST00000158386 143 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm27220-201ENSMUST00000183453 262 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm27869-201ENSMUST00000184327 122 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir7047-201ENSMUST00000184595 64 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm38311-201ENSMUST00000192945 165 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm30534-201ENSMUST00000217928 207 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr815-201ENSMUST00000071557 951 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm9174-201ENSMUST00000078149 255 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25131-201ENSMUST00000082653 151 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22265-201ENSMUST00000082947 116 ntBASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trbv1A0A0B4J1G7 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trbv1A0A0B4J1G7 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm26504-201ENSMUST00000102033 94 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm25500-201ENSMUST00000104426 123 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm15110-201ENSMUST00000117545 881 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm15936-201ENSMUST00000118706 460 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm4732-201ENSMUST00000118778 473 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm12787-201ENSMUST00000119234 396 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm14940-201ENSMUST00000119309 495 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm15112-201ENSMUST00000120152 860 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm12876-201ENSMUST00000120975 408 ntBASIC2.02□□□□□ -2.09
Trbv1A0A0B4J1G7 Gm24836-201ENSMUST00000122609 108 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms