Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Gm22061-201ENSMUST00000082557 107 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Snord104-201ENSMUST00000083192 70 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 AC154511.1-201ENSMUST00000222578 1587 ntBASIC1.98□□□□□ -2.09
Trav12-3A0A075B648 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Mir542-201ENSMUST00000102186 85 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm24126-201ENSMUST00000104111 106 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm12697-201ENSMUST00000118008 667 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm11460-201ENSMUST00000118200 361 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm14897-201ENSMUST00000118213 207 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm14007-201ENSMUST00000118288 210 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm14428-201ENSMUST00000120408 822 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm15272-201ENSMUST00000120865 233 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm15466-201ENSMUST00000122299 333 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm23380-201ENSMUST00000158448 103 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm25156-201ENSMUST00000179809 79 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm27659-201ENSMUST00000183472 98 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Mir6410-201ENSMUST00000184204 104 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm38311-201ENSMUST00000192945 165 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm38154-201ENSMUST00000195444 340 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43722-201ENSMUST00000196054 124 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43114-201ENSMUST00000198298 343 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43284-201ENSMUST00000200103 253 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43550-201ENSMUST00000200597 303 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43232-201ENSMUST00000201346 364 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm43600-201ENSMUST00000202134 223 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm18791-201ENSMUST00000204611 726 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm44609-201ENSMUST00000207157 460 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm18346-201ENSMUST00000216782 325 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm19326-201ENSMUST00000219818 326 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm23848-201ENSMUST00000083826 106 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr895-201ENSMUST00000093864 951 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Gm23741-201ENSMUST00000097237 171 ntBASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Trav12-3A0A075B648 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 AC124561.2-201ENSMUST00000226657 1973 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm23744-201ENSMUST00000104231 149 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm26418-201ENSMUST00000104275 137 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm22496-201ENSMUST00000104493 88 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Amd-ps1-201ENSMUST00000120127 994 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm14629-201ENSMUST00000122428 144 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm23078-201ENSMUST00000157848 148 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm22947-201ENSMUST00000158559 91 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Mir1927-201ENSMUST00000158579 109 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm24681-201ENSMUST00000158760 107 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm25451-201ENSMUST00000177832 121 ntBASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav12-3A0A075B648 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms