Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 AC159246.1-201ENSMUST00000214478 249 ntBASIC1.46□□□□□ -2.18
Trav9-1A0A075B601 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.46□□□□□ -2.18
Trav9-1A0A075B601 Gm22866-201ENSMUST00000083947 177 ntBASIC1.46□□□□□ -2.18
Trav9-1A0A075B601 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav9-1A0A075B601 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25090-201ENSMUST00000104000 132 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm15896-201ENSMUST00000118045 440 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm12607-201ENSMUST00000120724 493 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm12006-201ENSMUST00000120786 403 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm16218-201ENSMUST00000155424 388 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25339-201ENSMUST00000157458 232 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm23391-201ENSMUST00000157579 104 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25332-201ENSMUST00000158038 105 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25642-201ENSMUST00000175137 66 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Trbv6-201ENSMUST00000193743 276 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm37119-201ENSMUST00000195691 389 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm42465-201ENSMUST00000197036 492 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm43345-201ENSMUST00000199484 269 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm45013-201ENSMUST00000206883 178 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm20304-201ENSMUST00000218168 444 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25813-201ENSMUST00000082748 191 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Gm25124-201ENSMUST00000083345 164 ntBASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav9-1A0A075B601 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm5287-201ENSMUST00000120666 598 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm15536-201ENSMUST00000121411 114 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm13555-201ENSMUST00000121668 319 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm23885-201ENSMUST00000122682 294 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm23469-201ENSMUST00000157131 104 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm7858-201ENSMUST00000190177 622 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm19118-201ENSMUST00000222554 98 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm23846-201ENSMUST00000083835 107 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.44□□□□□ -2.18
Trav9-1A0A075B601 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm22494-201ENSMUST00000104495 128 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm12513-201ENSMUST00000118617 352 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm14748-201ENSMUST00000119819 411 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm25051-201ENSMUST00000158602 249 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm22891-201ENSMUST00000158641 164 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm4468-201ENSMUST00000170206 294 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm27161-201ENSMUST00000183960 562 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Mir6901-201ENSMUST00000185062 62 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm18448-201ENSMUST00000186286 599 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm43407-201ENSMUST00000199816 317 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm3442-201ENSMUST00000216808 710 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Snord7-201ENSMUST00000083781 97 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm24698-201ENSMUST00000083883 130 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav9-1A0A075B601 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trav9-1A0A075B601 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.42□□□□□ -2.18
Trav9-1A0A075B601 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trav9-1A0A075B601 Gm6954-201ENSMUST00000117416 225 ntBASIC1.42□□□□□ -2.18
Trav9-1A0A075B601 Gm6461-201ENSMUST00000120015 633 ntBASIC1.42□□□□□ -2.18
Trav9-1A0A075B601 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms