Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm44927-201ENSMUST00000207573 716 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
H2afb1S4R1E0 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.9□□□□□ -1.94
H2afb1S4R1E0 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.9□□□□□ -1.94
H2afb1S4R1E0 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
H2afb1S4R1E0 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
H2afb1S4R1E0 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.94
H2afb1S4R1E0 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm14751-201ENSMUST00000117693 222 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm14681-201ENSMUST00000118047 411 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm7916-201ENSMUST00000120325 456 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm14101-201ENSMUST00000121502 473 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm23206-201ENSMUST00000122720 184 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm24534-201ENSMUST00000157949 291 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Mir6385-201ENSMUST00000184295 105 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm6651-201ENSMUST00000189471 271 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm29740-201ENSMUST00000193182 655 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm37616-201ENSMUST00000193974 322 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm37495-201ENSMUST00000194590 264 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm22739-201ENSMUST00000083437 160 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Mir346-201ENSMUST00000083547 98 ntBASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
H2afb1S4R1E0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm2066-201ENSMUST00000118046 389 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm11693-201ENSMUST00000119625 565 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm7308-201ENSMUST00000121087 447 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm24914-201ENSMUST00000157285 313 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm24720-201ENSMUST00000157518 166 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm22789-201ENSMUST00000157884 130 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm25519-201ENSMUST00000158392 127 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm25163-201ENSMUST00000158905 104 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm27317-201ENSMUST00000183533 95 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm27999-201ENSMUST00000183539 193 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm19193-201ENSMUST00000190263 590 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm37771-201ENSMUST00000193121 265 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm37869-201ENSMUST00000193385 595 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm34779-201ENSMUST00000210036 263 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm23645-201ENSMUST00000083228 108 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.89□□□□□ -1.95
H2afb1S4R1E0 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.89□□□□□ -1.95
H2afb1S4R1E0 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm23744-201ENSMUST00000104231 149 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm11430-201ENSMUST00000121317 217 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm13406-201ENSMUST00000121991 256 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm5958-201ENSMUST00000147698 297 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm22563-201ENSMUST00000157333 269 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm23124-201ENSMUST00000157650 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms