Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm23336-201ENSMUST00000117023 123 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm14736-201ENSMUST00000121470 336 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm24546-201ENSMUST00000158652 102 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Mir1954-201ENSMUST00000175595 86 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm24863-201ENSMUST00000179499 107 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm20561-201ENSMUST00000188131 292 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm15235-201ENSMUST00000200572 194 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.05□□□□□ -2.08
Scn11aQ9R053 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Scn11aQ9R053 Gm24541-201ENSMUST00000103871 96 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn11aQ9R053 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.04□□□□□ -2.08
Scn11aQ9R053 Gm25966-201ENSMUST00000157169 117 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Gm17153-201ENSMUST00000171314 490 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Gm22929-201ENSMUST00000175517 107 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Mir6962-201ENSMUST00000199512 63 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.04□□□□□ -2.08
Scn11aQ9R053 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Scn11aQ9R053 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn11aQ9R053 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn11aQ9R053 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm11438-201ENSMUST00000121582 189 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Scn11aQ9R053 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Scn11aQ9R053 Mir6240-201ENSMUST00000184281 117 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm28383-201ENSMUST00000187563 139 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm29262-201ENSMUST00000190084 196 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Gm43193-201ENSMUST00000197732 441 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.03□□□□□ -2.08
Scn11aQ9R053 Snord71-201ENSMUST00000104361 85 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm13714-201ENSMUST00000117313 221 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm12697-201ENSMUST00000118008 667 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm11268-201ENSMUST00000118347 267 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm15488-201ENSMUST00000121682 670 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm24902-201ENSMUST00000158126 123 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm23813-201ENSMUST00000175153 77 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm43765-201ENSMUST00000196303 893 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Mir7021-201ENSMUST00000197026 63 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.03□□□□□ -2.09
Scn11aQ9R053 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm15108-201ENSMUST00000116160 803 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm15111-201ENSMUST00000122142 878 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm24783-201ENSMUST00000157639 100 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm6788-201ENSMUST00000166459 270 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Mir320-201ENSMUST00000083594 82 ntBASIC2.02□□□□□ -2.09
Scn11aQ9R053 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Scn11aQ9R053 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Scn11aQ9R053 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 Mir147-201ENSMUST00000102354 79 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 Gm6923-201ENSMUST00000118343 406 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 Gm14588-201ENSMUST00000119895 172 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 Gm44476-201ENSMUST00000196225 91 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 Gm44718-201ENSMUST00000206886 359 ntBASIC2.01□□□□□ -2.09
Scn11aQ9R053 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Scn11aQ9R053 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Scn11aQ9R053 Gm14841-201ENSMUST00000121067 758 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm37778-201ENSMUST00000191732 190 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2□□□□□ -2.09
Scn11aQ9R053 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2□□□□□ -2.09
Scn11aQ9R053 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Scn11aQ9R053 Gm3081-201ENSMUST00000193413 3025 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm5937-201ENSMUST00000119715 643 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2□□□□□ -2.09
Scn11aQ9R053 Gm23207-201ENSMUST00000158665 102 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2□□□□□ -2.09
Scn11aQ9R053 Gm42465-201ENSMUST00000197036 492 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm43371-201ENSMUST00000202838 1031 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Gm44548-201ENSMUST00000208929 192 ntBASIC2□□□□□ -2.09
Scn11aQ9R053 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Scn11aQ9R053 AC154511.1-201ENSMUST00000222578 1587 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms