Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Snora69-201ENSMUST00000083708 131 ntBASIC1.75□□□□□ -2.13
Trem3Q9JKE1 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.75□□□□□ -2.13
Trem3Q9JKE1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm8569-201ENSMUST00000117630 647 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm13085-201ENSMUST00000118356 171 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm12006-201ENSMUST00000120786 403 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm14411-201ENSMUST00000121798 914 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm14651-201ENSMUST00000147192 442 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm26041-201ENSMUST00000158148 108 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm28637-201ENSMUST00000179424 345 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm27599-201ENSMUST00000183758 174 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Mir7658-201ENSMUST00000184043 57 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Mir6371-201ENSMUST00000184470 111 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm2719-201ENSMUST00000191929 444 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm37213-201ENSMUST00000193077 586 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm45247-201ENSMUST00000210757 309 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm35262-201ENSMUST00000215133 267 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm19233-201ENSMUST00000219772 936 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm25792-201ENSMUST00000083289 100 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm10343-201ENSMUST00000096279 348 ntBASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Trem3Q9JKE1 Gm23803-201ENSMUST00000104610 132 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm5287-201ENSMUST00000120666 598 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm15530-201ENSMUST00000122206 555 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm14129-201ENSMUST00000122436 291 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm25391-201ENSMUST00000157342 134 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm25339-201ENSMUST00000157458 232 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm24691-201ENSMUST00000157762 140 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm26000-201ENSMUST00000157991 107 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Mir3066-201ENSMUST00000175296 83 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Mir3076-201ENSMUST00000175415 60 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Trbv6-201ENSMUST00000193743 276 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm44393-201ENSMUST00000197418 138 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Mir137-201ENSMUST00000083635 73 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm22353-201ENSMUST00000083918 136 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.73□□□□□ -2.13
Trem3Q9JKE1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm22554-201ENSMUST00000157798 147 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm24857-201ENSMUST00000158061 310 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Mir3112-201ENSMUST00000175431 82 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm8392-201ENSMUST00000185647 835 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm29184-201ENSMUST00000190038 334 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm37557-201ENSMUST00000191640 139 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm18340-201ENSMUST00000196342 609 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm44295-201ENSMUST00000203805 437 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm45173-201ENSMUST00000206819 305 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm45791-201ENSMUST00000212908 352 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm19118-201ENSMUST00000222554 98 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 AC139294.2-201ENSMUST00000227159 285 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm22866-201ENSMUST00000083947 177 ntBASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Trem3Q9JKE1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
Trem3Q9JKE1 Gm23472-201ENSMUST00000101806 191 ntBASIC1.71□□□□□ -2.14
Trem3Q9JKE1 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Trem3Q9JKE1 Gm14845-201ENSMUST00000121259 306 ntBASIC1.71□□□□□ -2.14
Trem3Q9JKE1 Gm25808-201ENSMUST00000122784 284 ntBASIC1.71□□□□□ -2.14
Trem3Q9JKE1 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms