Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm23144-201ENSMUST00000180226 107 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm38356-201ENSMUST00000194313 408 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm42526-201ENSMUST00000198956 393 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm43217-201ENSMUST00000199513 367 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm45387-201ENSMUST00000209792 632 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm24268-201ENSMUST00000082990 110 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm5670-201ENSMUST00000093546 372 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm23256-201ENSMUST00000102235 110 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm26140-201ENSMUST00000103807 110 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm22755-201ENSMUST00000157143 100 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm24240-201ENSMUST00000157785 135 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm24534-201ENSMUST00000157949 291 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm3470-201ENSMUST00000160819 420 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm21754-201ENSMUST00000177550 479 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm22908-201ENSMUST00000177620 110 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm21758-201ENSMUST00000179336 819 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm26968-201ENSMUST00000182894 481 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm20832-201ENSMUST00000189076 665 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm28241-201ENSMUST00000190916 235 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm28098-201ENSMUST00000191361 699 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm37658-201ENSMUST00000192672 315 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm31511-201ENSMUST00000193134 657 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm30638-201ENSMUST00000195570 656 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm36728-201ENSMUST00000195782 665 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm42818-201ENSMUST00000198869 987 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm7675-201ENSMUST00000208828 686 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm45380-201ENSMUST00000210465 315 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm29809-201ENSMUST00000218423 493 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm22572-201ENSMUST00000082985 105 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm26055-201ENSMUST00000083038 107 ntBASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim54Q9ERP3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm14657-201ENSMUST00000117461 302 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm14918-201ENSMUST00000118153 268 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm8217-201ENSMUST00000119136 465 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm11512-201ENSMUST00000119669 663 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm6762-201ENSMUST00000121769 289 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm12412-201ENSMUST00000121867 328 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm14804-201ENSMUST00000122322 508 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm11395-201ENSMUST00000181011 499 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.7□□□□□ -1.82
Trim54Q9ERP3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm13511-201ENSMUST00000121167 363 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm25621-201ENSMUST00000157223 114 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm24138-201ENSMUST00000157572 114 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm22108-201ENSMUST00000177961 106 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm24798-201ENSMUST00000179334 106 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm24464-201ENSMUST00000179697 107 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm28781-201ENSMUST00000185760 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm29574-201ENSMUST00000186226 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm28828-201ENSMUST00000186601 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm28594-201ENSMUST00000187022 661 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms