Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm13627-201ENSMUST00000119700 706 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm14821-201ENSMUST00000121975 435 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm14129-201ENSMUST00000122436 291 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm25321-201ENSMUST00000122558 102 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm24769-201ENSMUST00000158506 129 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm17064-201ENSMUST00000167690 452 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm5224-201ENSMUST00000183060 350 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm27599-201ENSMUST00000183758 174 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm19193-201ENSMUST00000190263 590 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm43600-201ENSMUST00000202134 223 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm44161-201ENSMUST00000203532 253 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm45395-201ENSMUST00000209891 559 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm23723-201ENSMUST00000082996 132 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm10780-201ENSMUST00000099459 285 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
Lima1Q9ERG0 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm13756-201ENSMUST00000117618 222 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm12443-201ENSMUST00000122308 323 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm25808-201ENSMUST00000122784 284 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm22560-201ENSMUST00000157332 120 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm24771-201ENSMUST00000158508 137 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm8292-201ENSMUST00000162574 396 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm18645-201ENSMUST00000209593 651 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm45696-201ENSMUST00000212088 985 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Lima1Q9ERG0 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.27□□□□□ -2.05
Lima1Q9ERG0 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm22752-201ENSMUST00000102083 109 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm22718-201ENSMUST00000122701 315 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm14333-201ENSMUST00000130484 264 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm24925-201ENSMUST00000178157 107 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm27520-201ENSMUST00000184872 81 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm37684-201ENSMUST00000192779 355 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm43142-201ENSMUST00000198670 361 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm45049-201ENSMUST00000207586 591 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm18598-201ENSMUST00000207724 597 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm18414-201ENSMUST00000210858 694 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm10343-201ENSMUST00000096279 348 ntBASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Lima1Q9ERG0 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm25407-201ENSMUST00000104102 134 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm23803-201ENSMUST00000104610 132 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm12889-201ENSMUST00000118684 241 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm12640-201ENSMUST00000120097 310 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm15193-201ENSMUST00000120224 865 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm24959-201ENSMUST00000157924 146 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Mir3112-201ENSMUST00000175431 82 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm20915-201ENSMUST00000191575 663 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm37353-201ENSMUST00000194497 313 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm42828-201ENSMUST00000199669 469 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm43901-201ENSMUST00000203247 453 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.25□□□□□ -2.05
Lima1Q9ERG0 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm30738-201ENSMUST00000221346 502 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms