Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm25856-201ENSMUST00000082786 75 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm25199-201ENSMUST00000083095 104 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm11363-201ENSMUST00000121672 548 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm12956-201ENSMUST00000122184 414 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm12443-201ENSMUST00000122308 323 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm22099-201ENSMUST00000157925 123 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Mir6383-201ENSMUST00000184545 116 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm28647-201ENSMUST00000188416 197 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43070-201ENSMUST00000196938 415 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Trdv3-201ENSMUST00000198551 309 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm9373-201ENSMUST00000208724 599 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm18645-201ENSMUST00000209593 651 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm24928-201ENSMUST00000083399 107 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm25897-201ENSMUST00000083709 107 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.3□□□□□ -2.04
Ccdc3Q9D6Y1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm13082-201ENSMUST00000118877 561 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm13541-201ENSMUST00000119519 283 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm29513-201ENSMUST00000185741 202 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43541-201ENSMUST00000197208 581 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43669-201ENSMUST00000198229 436 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43804-201ENSMUST00000198280 456 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm35570-201ENSMUST00000198730 681 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43600-201ENSMUST00000202134 223 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Snord104-201ENSMUST00000083192 70 ntBASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm23011-201ENSMUST00000104148 132 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm13433-201ENSMUST00000121701 240 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm1989-201ENSMUST00000126244 636 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm22769-201ENSMUST00000158367 98 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm25026-201ENSMUST00000175017 188 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Mir3112-201ENSMUST00000175431 82 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm24757-201ENSMUST00000176987 371 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm23190-201ENSMUST00000180307 64 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Mir8118-201ENSMUST00000183962 129 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm27582-201ENSMUST00000184084 126 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm18956-201ENSMUST00000192857 480 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43142-201ENSMUST00000198670 361 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm6590-201ENSMUST00000203343 687 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm18268-201ENSMUST00000208445 943 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc3Q9D6Y1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Ccdc3Q9D6Y1 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23472-201ENSMUST00000101806 191 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13731-201ENSMUST00000117332 196 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13862-201ENSMUST00000121220 197 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14736-201ENSMUST00000121470 336 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm24546-201ENSMUST00000158652 102 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm24497-201ENSMUST00000177868 191 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms