Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm25807-201ENSMUST00000122783 305 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm25341-201ENSMUST00000157461 268 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm24061-201ENSMUST00000157489 120 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm24211-201ENSMUST00000158264 107 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm25163-201ENSMUST00000158905 104 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm20534-201ENSMUST00000172957 172 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Mir5129-201ENSMUST00000174938 78 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm26195-201ENSMUST00000175035 101 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm11395-201ENSMUST00000181011 499 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm18486-201ENSMUST00000184040 298 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm19637-201ENSMUST00000185933 579 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm29192-201ENSMUST00000190942 377 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm37771-201ENSMUST00000193121 265 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm18433-202ENSMUST00000195682 196 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm44910-201ENSMUST00000208451 396 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm19219-201ENSMUST00000215863 724 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Snord35b-201ENSMUST00000082833 87 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Snord38a-201ENSMUST00000083746 71 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm24987-201ENSMUST00000104453 134 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm9009-201ENSMUST00000117321 326 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm11576-201ENSMUST00000117433 417 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm13804-201ENSMUST00000119552 172 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm24901-201ENSMUST00000158125 110 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm24552-201ENSMUST00000158646 103 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm24464-201ENSMUST00000179697 107 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm18403-201ENSMUST00000192907 529 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm37869-201ENSMUST00000193385 595 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm9379-201ENSMUST00000196790 646 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm2189-201ENSMUST00000201419 429 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm35405-201ENSMUST00000218754 400 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx28Q9CWT6 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm25764-201ENSMUST00000104092 134 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm14657-201ENSMUST00000117461 302 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm12697-201ENSMUST00000118008 667 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm23429-201ENSMUST00000122486 149 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm25572-201ENSMUST00000157527 172 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm25637-201ENSMUST00000157529 107 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm24784-201ENSMUST00000157640 62 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm24553-201ENSMUST00000158653 131 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm17162-201ENSMUST00000168538 473 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm28151-201ENSMUST00000189404 951 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm17966-201ENSMUST00000193453 594 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm17906-201ENSMUST00000202480 901 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm5322-201ENSMUST00000206142 699 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm44961-201ENSMUST00000207450 196 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm45273-201ENSMUST00000211559 281 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm24147-201ENSMUST00000082763 144 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm22572-201ENSMUST00000082985 105 ntBASIC3.09□□□□□ -1.91
Ddx28Q9CWT6 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.09□□□□□ -1.92
Ddx28Q9CWT6 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.09□□□□□ -1.92
Ddx28Q9CWT6 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.08□□□□□ -1.92
Ddx28Q9CWT6 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ddx28Q9CWT6 Gm25318-201ENSMUST00000122554 314 ntBASIC3.08□□□□□ -1.92
Ddx28Q9CWT6 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms