Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm12071-201ENSMUST00000121968 469 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Mir5129-201ENSMUST00000174938 78 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm18448-201ENSMUST00000186286 599 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm37599-201ENSMUST00000193067 489 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm44157-201ENSMUST00000204720 410 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm18252-203ENSMUST00000215855 757 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm24622-201ENSMUST00000082619 162 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Gm22740-201ENSMUST00000083439 109 ntBASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Smc1aQ9CU62 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm15110-201ENSMUST00000117545 881 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm13627-201ENSMUST00000119700 706 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm12876-201ENSMUST00000120975 408 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm26101-201ENSMUST00000157246 105 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm24959-201ENSMUST00000157924 146 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm6395-201ENSMUST00000167639 691 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm37616-201ENSMUST00000193974 322 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm9973-202ENSMUST00000220926 166 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm2544-201ENSMUST00000222702 756 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Gm25008-201ENSMUST00000083809 81 ntBASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Smc1aQ9CU62 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm25213-201ENSMUST00000102388 113 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm11430-201ENSMUST00000121317 217 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm26348-201ENSMUST00000157528 240 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm22849-201ENSMUST00000157713 307 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm27428-201ENSMUST00000184289 110 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm6060-201ENSMUST00000188671 251 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm37692-201ENSMUST00000192633 232 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm37438-201ENSMUST00000192813 393 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm43384-201ENSMUST00000200569 637 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm29754-201ENSMUST00000206269 358 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Gm7753-201ENSMUST00000221007 867 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Smc1aQ9CU62 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm16354-201ENSMUST00000155376 150 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm22560-201ENSMUST00000157332 120 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm22390-201ENSMUST00000157588 325 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm20656-201ENSMUST00000176925 518 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm29553-201ENSMUST00000189692 279 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm19202-201ENSMUST00000198096 808 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm45438-201ENSMUST00000210242 564 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Gm45382-201ENSMUST00000210607 151 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Smc1aQ9CU62 Mir344c-201ENSMUST00000103919 92 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm14448-201ENSMUST00000116383 210 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm12155-201ENSMUST00000121267 160 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm25270-201ENSMUST00000122606 138 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm23268-201ENSMUST00000175494 78 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm25360-201ENSMUST00000178786 191 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm21893-201ENSMUST00000179119 397 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms