Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm14579-201ENSMUST00000117068 283 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm24291-201ENSMUST00000157633 162 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm26411-201ENSMUST00000157668 107 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm20415-201ENSMUST00000172877 423 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm24813-201ENSMUST00000175310 84 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm28169-201ENSMUST00000190342 345 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm24350-202ENSMUST00000198309 132 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm31520-201ENSMUST00000203048 733 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm44060-201ENSMUST00000204440 410 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm45912-201ENSMUST00000210646 543 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm23615-201ENSMUST00000082602 65 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.46□□□□□ -2.02
Use1Q9CQ56 Gm11221-201ENSMUST00000117230 597 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm15113-201ENSMUST00000119280 836 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm14240-201ENSMUST00000120353 546 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm23867-201ENSMUST00000122649 274 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm25280-201ENSMUST00000157269 101 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm26348-201ENSMUST00000157528 240 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm24436-201ENSMUST00000157889 302 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm20718-201ENSMUST00000176058 259 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm21489-201ENSMUST00000189668 818 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm29516-201ENSMUST00000190402 468 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm44041-201ENSMUST00000203678 396 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm18729-201ENSMUST00000217230 621 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm24622-201ENSMUST00000082619 162 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Gm25008-201ENSMUST00000083809 81 ntBASIC2.45□□□□□ -2.02
Use1Q9CQ56 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Use1Q9CQ56 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm12787-201ENSMUST00000119234 396 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm13406-201ENSMUST00000121991 256 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm26186-201ENSMUST00000157689 125 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm17061-201ENSMUST00000163167 499 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm17038-201ENSMUST00000166586 494 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm44295-201ENSMUST00000203805 437 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm29920-201ENSMUST00000206876 754 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm2446-201ENSMUST00000220144 772 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Use1Q9CQ56 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.44□□□□□ -2.02
Use1Q9CQ56 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm25213-201ENSMUST00000102388 113 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm22023-201ENSMUST00000104354 130 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Snora36b-201ENSMUST00000104383 132 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms