Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Msh4Q99MT2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.5□□□□□ -1.85
Msh4Q99MT2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.5□□□□□ -1.85
Msh4Q99MT2 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Msh4Q99MT2 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Msh4Q99MT2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.5□□□□□ -1.85
Msh4Q99MT2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm22452-201ENSMUST00000122804 104 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm22890-201ENSMUST00000158642 144 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm20399-201ENSMUST00000174652 132 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm28010-201ENSMUST00000179485 126 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm26914-201ENSMUST00000182262 223 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm27445-201ENSMUST00000184484 72 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm27385-201ENSMUST00000184747 104 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Trbv8-201ENSMUST00000194020 285 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm19620-201ENSMUST00000195972 434 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm44324-201ENSMUST00000198517 135 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm43578-201ENSMUST00000201250 459 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm5001-201ENSMUST00000204361 331 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm44472-201ENSMUST00000204922 943 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Msh4Q99MT2 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.49□□□□□ -1.85
Msh4Q99MT2 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm12787-201ENSMUST00000119234 396 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm15760-201ENSMUST00000119553 283 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm11704-201ENSMUST00000120031 214 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm16005-201ENSMUST00000120515 269 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm11384-201ENSMUST00000121376 303 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm11229-201ENSMUST00000121993 437 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm12238-201ENSMUST00000127764 124 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm25624-201ENSMUST00000157222 275 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm23257-201ENSMUST00000158322 132 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm26159-201ENSMUST00000158968 104 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm8207-201ENSMUST00000171204 502 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm20543-201ENSMUST00000174200 726 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Snord92-201ENSMUST00000175548 85 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm44726-201ENSMUST00000203427 217 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm45101-201ENSMUST00000208327 232 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm35857-201ENSMUST00000212739 178 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm7751-201ENSMUST00000212868 709 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msh4Q99MT2 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm23515-201ENSMUST00000082829 107 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm24043-201ENSMUST00000083108 116 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.48□□□□□ -1.85
Msh4Q99MT2 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
Msh4Q99MT2 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm9043-201ENSMUST00000119677 314 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm13419-201ENSMUST00000121711 271 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm14768-201ENSMUST00000122126 678 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm22080-201ENSMUST00000157591 106 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm23028-201ENSMUST00000158773 265 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm27903-201ENSMUST00000175482 126 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm28399-201ENSMUST00000186221 318 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm28572-201ENSMUST00000187444 318 ntBASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.47□□□□□ -1.85
Msh4Q99MT2 Gm5034-201ENSMUST00000199115 634 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms