Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Mir673-201ENSMUST00000102361 91 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Mir676-201ENSMUST00000102443 89 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm14129-201ENSMUST00000122436 291 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm16358-201ENSMUST00000146046 210 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm22843-201ENSMUST00000157710 134 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm23666-201ENSMUST00000158053 116 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm16303-201ENSMUST00000161498 390 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm20415-201ENSMUST00000172877 423 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm2092-201ENSMUST00000178887 639 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm2759-201ENSMUST00000179938 639 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Mir6238-201ENSMUST00000184140 129 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm8874-201ENSMUST00000196826 286 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm43804-201ENSMUST00000198280 456 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm43651-201ENSMUST00000199796 439 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm44419-201ENSMUST00000203338 229 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm7540-201ENSMUST00000219764 926 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 CT030166.2-201ENSMUST00000222021 368 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm23412-201ENSMUST00000083017 107 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm10161-201ENSMUST00000091506 204 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm26329-201ENSMUST00000093723 110 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Gm43705-201ENSMUST00000195958 3717 ntBASIC5.05□□□□□ -1.6
Usp40Q8BWR4 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm24127-201ENSMUST00000104110 130 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm12806-201ENSMUST00000119384 268 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm26412-201ENSMUST00000157666 55 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm17148-201ENSMUST00000164702 249 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm24618-201ENSMUST00000177718 94 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm23953-201ENSMUST00000178214 94 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm26332-201ENSMUST00000179813 94 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm23966-201ENSMUST00000179823 107 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm22863-201ENSMUST00000180265 94 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm27028-201ENSMUST00000182303 399 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Mir6382-201ENSMUST00000184055 110 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm18854-201ENSMUST00000211196 329 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm35262-201ENSMUST00000215133 267 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm25008-201ENSMUST00000083809 81 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Usp40Q8BWR4 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.04□□□□□ -1.6
Usp40Q8BWR4 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23941-201ENSMUST00000101953 107 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm12871-201ENSMUST00000118758 438 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm14586-201ENSMUST00000119571 408 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23326-201ENSMUST00000157419 105 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23538-201ENSMUST00000157535 101 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23901-201ENSMUST00000157570 107 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23755-201ENSMUST00000157578 343 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm24750-201ENSMUST00000157843 104 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm23779-201ENSMUST00000157938 64 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm24675-201ENSMUST00000158757 259 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm29452-201ENSMUST00000187996 313 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm28860-201ENSMUST00000188103 313 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm37757-201ENSMUST00000193072 210 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm37097-201ENSMUST00000193676 336 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm45173-201ENSMUST00000206819 305 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm45420-201ENSMUST00000211243 425 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm45710-201ENSMUST00000212847 215 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms