Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Snord14c-201ENSMUST00000101927 86 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm15223-201ENSMUST00000120989 826 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm11229-201ENSMUST00000121993 437 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm3104-201ENSMUST00000171004 473 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Mir3066-201ENSMUST00000175296 83 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm24100-201ENSMUST00000178592 79 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm28412-201ENSMUST00000187243 177 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm45048-201ENSMUST00000207058 429 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm18488-201ENSMUST00000215082 364 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm26055-201ENSMUST00000083038 107 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm24446-201ENSMUST00000083982 156 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm22115-201ENSMUST00000103976 133 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm23923-201ENSMUST00000104108 133 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm11219-201ENSMUST00000118565 358 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm15113-201ENSMUST00000119280 836 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm11785-201ENSMUST00000120165 601 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm24190-201ENSMUST00000157976 216 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm23380-201ENSMUST00000158448 103 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm24876-201ENSMUST00000158780 92 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm17063-201ENSMUST00000168135 456 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm1833-201ENSMUST00000191608 682 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm17911-201ENSMUST00000210806 877 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc40Q8BI79 Gm13482-201ENSMUST00000119842 254 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm25945-201ENSMUST00000122484 135 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm24787-201ENSMUST00000157380 123 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm6788-201ENSMUST00000166459 270 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm26585-201ENSMUST00000180890 630 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm27676-201ENSMUST00000183669 61 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm28755-201ENSMUST00000185773 199 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm45513-201ENSMUST00000210228 376 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm25755-201ENSMUST00000083396 107 ntBASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc40Q8BI79 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26504-201ENSMUST00000102033 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm25308-201ENSMUST00000104171 158 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm14657-201ENSMUST00000117461 302 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm11813-201ENSMUST00000118586 291 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm14843-201ENSMUST00000119596 212 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm22792-201ENSMUST00000157225 133 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26502-201ENSMUST00000177732 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm25350-201ENSMUST00000177849 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm23446-201ENSMUST00000177977 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26201-201ENSMUST00000178047 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm24711-201ENSMUST00000178062 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm24609-201ENSMUST00000178166 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm23265-201ENSMUST00000178321 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm22812-201ENSMUST00000178329 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26246-201ENSMUST00000178388 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm25155-201ENSMUST00000178450 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm24760-201ENSMUST00000178530 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm22285-201ENSMUST00000178576 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm22417-201ENSMUST00000178656 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26270-201ENSMUST00000178690 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm23313-201ENSMUST00000178931 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms