Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm37550-201ENSMUST00000193230 463 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm5358-201ENSMUST00000212814 353 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm22304-201ENSMUST00000082688 129 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm5670-201ENSMUST00000093546 372 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.74□□□□□ -1.81
Smarca1Q6PGB8 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm14681-201ENSMUST00000118047 411 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm12412-201ENSMUST00000121867 328 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm6374-201ENSMUST00000159051 788 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm3470-201ENSMUST00000160819 420 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm17186-201ENSMUST00000171742 456 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm8392-201ENSMUST00000185647 835 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm44266-201ENSMUST00000205235 500 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm44961-201ENSMUST00000207450 196 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm44754-201ENSMUST00000208155 400 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm9712-201ENSMUST00000210842 311 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.73□□□□□ -1.81
Smarca1Q6PGB8 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm13804-201ENSMUST00000119552 172 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm12006-201ENSMUST00000120786 403 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm22957-201ENSMUST00000122511 123 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm22718-201ENSMUST00000122701 315 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm24138-201ENSMUST00000157572 114 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm24464-201ENSMUST00000179697 107 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm11395-201ENSMUST00000181011 499 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Mir6413-201ENSMUST00000184049 108 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm27957-201ENSMUST00000184054 127 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm27236-201ENSMUST00000184147 442 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm28404-201ENSMUST00000190242 453 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm32340-201ENSMUST00000192883 259 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm42164-201ENSMUST00000198881 379 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm44600-201ENSMUST00000208540 111 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm7751-201ENSMUST00000212868 709 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm23097-201ENSMUST00000083448 105 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Snord38a-201ENSMUST00000083746 71 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm23741-201ENSMUST00000097237 171 ntBASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Smarca1Q6PGB8 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.71□□□□□ -1.81
Smarca1Q6PGB8 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Smarca1Q6PGB8 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm22023-201ENSMUST00000104354 130 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm6274-201ENSMUST00000118173 797 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm11876-201ENSMUST00000120002 269 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm15142-201ENSMUST00000121013 856 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm11384-201ENSMUST00000121376 303 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm14581-201ENSMUST00000121726 198 ntBASIC3.71□□□□□ -1.82
Smarca1Q6PGB8 Gm24936-201ENSMUST00000122598 247 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms