Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Gm23615-201ENSMUST00000082602 65 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.01□□□□□ -1.93
Snrnp40Q6PE01 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm25088-201ENSMUST00000101803 79 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm23697-201ENSMUST00000103897 110 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm22771-201ENSMUST00000104449 91 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm24068-201ENSMUST00000104513 132 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm15094-201ENSMUST00000118394 1131 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm14835-201ENSMUST00000119039 315 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm23885-201ENSMUST00000122682 294 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm12238-201ENSMUST00000127764 124 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm16327-201ENSMUST00000137146 228 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm23591-201ENSMUST00000157663 286 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Mir3964-201ENSMUST00000174898 74 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm25203-202ENSMUST00000200458 216 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 CT010480.5-201ENSMUST00000225026 217 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm25203-201ENSMUST00000082842 215 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Mir19a-201ENSMUST00000083482 82 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Snrnp40Q6PE01 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3□□□□□ -1.93
Snrnp40Q6PE01 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Snrnp40Q6PE01 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm11352-201ENSMUST00000119264 517 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm15112-201ENSMUST00000120152 860 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm11785-201ENSMUST00000120165 601 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm11384-201ENSMUST00000121376 303 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm14389-201ENSMUST00000140453 241 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm25391-201ENSMUST00000157342 134 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm23592-201ENSMUST00000157859 117 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Mir7014-201ENSMUST00000183853 63 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Snrnp40Q6PE01 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm14868-201ENSMUST00000117840 216 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm15030-201ENSMUST00000119804 484 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm13356-201ENSMUST00000121678 335 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm14694-201ENSMUST00000121856 282 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm15466-201ENSMUST00000122299 333 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm25283-201ENSMUST00000157272 77 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm25373-201ENSMUST00000158156 115 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm23257-201ENSMUST00000158322 132 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm24498-201ENSMUST00000158445 102 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm23380-201ENSMUST00000158448 103 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm16289-201ENSMUST00000162079 183 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm9593-201ENSMUST00000166034 469 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm4076-201ENSMUST00000179230 965 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Gm23379-201ENSMUST00000180026 107 ntBASIC2.98□□□□□ -1.93
Snrnp40Q6PE01 Mir6916-201ENSMUST00000184514 63 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms