Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm24019-201ENSMUST00000178620 107 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm26243-201ENSMUST00000179260 107 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm21726-201ENSMUST00000179654 392 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Mir6541-201ENSMUST00000183649 110 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Mir7j-201ENSMUST00000184427 122 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Trbv22-201ENSMUST00000191697 291 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb4Q6P8W9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm12814-201ENSMUST00000117091 846 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm12225-201ENSMUST00000117995 298 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm12803-201ENSMUST00000118907 821 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm5958-201ENSMUST00000147698 297 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm24393-201ENSMUST00000158135 97 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm22108-201ENSMUST00000177961 106 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm24798-201ENSMUST00000179334 106 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm27580-201ENSMUST00000183666 149 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm5322-201ENSMUST00000206142 699 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm2628-201ENSMUST00000218019 426 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.26□□□□□ -1.89
Hmgb4Q6P8W9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm23744-201ENSMUST00000104231 149 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm3940-201ENSMUST00000105087 432 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm14867-201ENSMUST00000120156 866 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm14694-201ENSMUST00000121856 282 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm25784-201ENSMUST00000122524 81 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm15733-201ENSMUST00000132957 242 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Mir5129-201ENSMUST00000174938 78 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm20612-201ENSMUST00000176318 236 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm24925-201ENSMUST00000178157 107 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm28002-201ENSMUST00000184832 100 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm18185-201ENSMUST00000186725 667 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm28925-201ENSMUST00000188586 168 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm42475-201ENSMUST00000201212 295 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Mir21a-201ENSMUST00000083521 92 ntBASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb4Q6P8W9 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms