Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm22726-201ENSMUST00000158089 179 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm17119-201ENSMUST00000163943 280 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Mir5099-201ENSMUST00000175257 74 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm20693-201ENSMUST00000177431 211 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Mir6413-201ENSMUST00000184049 108 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm28058-201ENSMUST00000186421 264 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm36934-201ENSMUST00000192007 306 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm20203-201ENSMUST00000192352 332 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm43155-201ENSMUST00000202661 494 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm25755-201ENSMUST00000083396 107 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Sp140Q6NSQ5 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm22831-201ENSMUST00000102473 109 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm23697-201ENSMUST00000103897 110 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm23577-201ENSMUST00000103950 110 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm25765-201ENSMUST00000104100 132 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm14001-201ENSMUST00000118847 247 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm14972-201ENSMUST00000121780 364 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm26746-201ENSMUST00000181722 487 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm28399-201ENSMUST00000186221 318 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm28572-201ENSMUST00000187444 318 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm43604-201ENSMUST00000199799 705 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm44472-201ENSMUST00000204922 943 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm45162-201ENSMUST00000209013 618 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm17989-201ENSMUST00000211543 412 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm45344-201ENSMUST00000211610 341 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm18016-201ENSMUST00000216119 801 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.85□□□□□ -1.79
Sp140Q6NSQ5 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm12982-201ENSMUST00000117408 190 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm5757-201ENSMUST00000117494 528 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm8217-201ENSMUST00000119136 465 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm14761-201ENSMUST00000121363 262 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm14821-201ENSMUST00000121975 435 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm22613-201ENSMUST00000122679 292 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm22849-201ENSMUST00000157713 307 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm25436-201ENSMUST00000158275 145 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm24499-201ENSMUST00000158446 104 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm22889-201ENSMUST00000158639 58 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm25369-201ENSMUST00000158848 132 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm22108-201ENSMUST00000177961 106 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm24798-201ENSMUST00000179334 106 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm26180-201ENSMUST00000179942 107 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm37568-201ENSMUST00000191755 364 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm44349-201ENSMUST00000197048 123 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm42814-201ENSMUST00000199370 460 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm7692-201ENSMUST00000213534 409 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.84□□□□□ -1.79
Sp140Q6NSQ5 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms