Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm12401-201ENSMUST00000118435 228 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.26□□□□□ -2.21
Col7a1Q63870 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm14982-201ENSMUST00000121102 442 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm2855-201ENSMUST00000166765 456 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm25247-201ENSMUST00000175475 90 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col7a1Q63870 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm13239-201ENSMUST00000119920 637 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm19193-201ENSMUST00000190263 590 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Col7a1Q63870 Mir7232-201ENSMUST00000197929 74 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm45173-201ENSMUST00000206819 305 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm43662-201ENSMUST00000198310 2271 ntBASIC1.25□□□□□ -2.21
Col7a1Q63870 Gm12351-201ENSMUST00000118727 292 ntBASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm16569-201ENSMUST00000160526 314 ntBASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm27636-201ENSMUST00000184528 122 ntBASIC1.24□□□□□ -2.21
Col7a1Q63870 AC122464.1-201ENSMUST00000202789 770 ntBASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm26072-201ENSMUST00000083135 107 ntBASIC1.24□□□□□ -2.21
Col7a1Q63870 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.24□□□□□ -2.21
Col7a1Q63870 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm6395-201ENSMUST00000167639 691 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 Mir3106-201ENSMUST00000175401 82 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm43193-201ENSMUST00000197732 441 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm44425-201ENSMUST00000203739 429 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col7a1Q63870 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm25497-201ENSMUST00000104425 132 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm18341-201ENSMUST00000197538 622 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 AC154270.1-201ENSMUST00000227226 426 ntBASIC1.23□□□□□ -2.21
Col7a1Q63870 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Col7a1Q63870 Gm13714-201ENSMUST00000117313 221 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm13868-201ENSMUST00000122411 294 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm24475-201ENSMUST00000157435 143 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm24690-201ENSMUST00000157759 97 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm25768-201ENSMUST00000158570 98 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm11395-201ENSMUST00000181011 499 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.22□□□□□ -2.21
Col7a1Q63870 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm43882-201ENSMUST00000204871 2264 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm13471-201ENSMUST00000122057 433 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm38217-201ENSMUST00000194358 910 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm23063-201ENSMUST00000102350 93 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm25506-201ENSMUST00000104339 70 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm12782-201ENSMUST00000117519 727 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm26178-201ENSMUST00000177706 107 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Gm23151-201ENSMUST00000178061 107 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.22□□□□□ -2.21
Col7a1Q63870 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Col7a1Q63870 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Col7a1Q63870 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm14927-201ENSMUST00000120283 454 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm26406-201ENSMUST00000158503 124 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col7a1Q63870 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
Col7a1Q63870 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm37311-201ENSMUST00000195541 2024 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm37899-201ENSMUST00000193116 8717 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm13743-201ENSMUST00000121486 724 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm23221-201ENSMUST00000158118 93 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm23385-201ENSMUST00000158592 295 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm25166-201ENSMUST00000158909 111 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 Gm25312-201ENSMUST00000178972 107 ntBASIC1.21□□□□□ -2.22
Col7a1Q63870 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.21□□□□□ -2.22
Col7a1Q63870 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms