Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Ss18Q62280 Gm22249-201ENSMUST00000082485 136 ntBASIC1.92□□□□□ -2.1
Ss18Q62280 Gm23249-201ENSMUST00000083369 161 ntBASIC1.92□□□□□ -2.1
Ss18Q62280 AC117199.1-201ENSMUST00000219940 3132 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ss18Q62280 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Ss18Q62280 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ss18Q62280 Gm23463-201ENSMUST00000122468 99 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm4916-201ENSMUST00000126139 642 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.91□□□□□ -2.1
Ss18Q62280 Gm23033-201ENSMUST00000157996 134 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm26215-201ENSMUST00000158584 139 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm23476-201ENSMUST00000158881 274 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ss18Q62280 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ss18Q62280 Gm17166-201ENSMUST00000172006 431 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm24813-201ENSMUST00000175310 84 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm24968-201ENSMUST00000179817 107 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm38231-201ENSMUST00000192030 347 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm38311-201ENSMUST00000192945 165 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ss18Q62280 Gm44393-201ENSMUST00000197418 138 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ss18Q62280 Gm43992-201ENSMUST00000204358 197 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC171206.2-201ENSMUST00000215252 389 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC155923.1-201ENSMUST00000215676 356 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC168266.1-201ENSMUST00000216024 226 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC164629.1-201ENSMUST00000220250 1113 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC1.91□□□□□ -2.1
Ss18Q62280 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 AC130823.2-201ENSMUST00000226169 290 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ss18Q62280 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ss18Q62280 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ss18Q62280 Snord104-201ENSMUST00000083192 70 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ss18Q62280 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Gm43889-201ENSMUST00000203950 3681 ntBASIC1.91□□□□□ -2.1
Ss18Q62280 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Ss18Q62280 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Ss18Q62280 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Ss18Q62280 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ss18Q62280 Gm14197-201ENSMUST00000117480 1049 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm14751-201ENSMUST00000117693 222 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm14020-201ENSMUST00000118165 662 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm14566-201ENSMUST00000118915 321 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm16021-201ENSMUST00000121176 219 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm14736-201ENSMUST00000121470 336 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm13555-201ENSMUST00000121668 319 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 DQ267100-201ENSMUST00000122600 72 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm12238-201ENSMUST00000127764 124 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ss18Q62280 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ss18Q62280 Gm24546-201ENSMUST00000158652 102 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm17538-201ENSMUST00000168236 327 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm20648-201ENSMUST00000175815 328 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm23402-201ENSMUST00000178130 107 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm27861-201ENSMUST00000183920 214 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm27161-201ENSMUST00000183960 562 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm21489-201ENSMUST00000189668 818 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm28169-201ENSMUST00000190342 345 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm37807-201ENSMUST00000194310 190 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC1.9□□□□□ -2.11
Ss18Q62280 Gm44478-201ENSMUST00000204875 114 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm44720-201ENSMUST00000206076 260 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm29920-201ENSMUST00000206876 754 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm45049-201ENSMUST00000207586 591 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Gm45551-201ENSMUST00000211459 928 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 AC125223.1-203ENSMUST00000225304 498 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ss18Q62280 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ss18Q62280 Gm25792-201ENSMUST00000083289 100 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.9□□□□□ -2.11
Ss18Q62280 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Ss18Q62280 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.9□□□□□ -2.11
Ss18Q62280 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ss18Q62280 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ss18Q62280 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ss18Q62280 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ss18Q62280 Gm12156-201ENSMUST00000119188 554 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm15103-201ENSMUST00000119893 871 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm14506-201ENSMUST00000121165 536 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm11321-201ENSMUST00000121257 902 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Ss18Q62280 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.89□□□□□ -2.11
Ss18Q62280 Gm24291-201ENSMUST00000157633 162 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm26411-201ENSMUST00000157668 107 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm26186-201ENSMUST00000157689 125 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Gm23473-201ENSMUST00000158883 116 ntBASIC1.89□□□□□ -2.11
Ss18Q62280 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms