Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.84□□□□□ -1.79
Ift88Q61371 Gm44909-201ENSMUST00000208756 165 ntBASIC3.84□□□□□ -1.79
Ift88Q61371 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ift88Q61371 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Ift88Q61371 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.84□□□□□ -1.79
Ift88Q61371 Gm22287-201ENSMUST00000083197 107 ntBASIC3.84□□□□□ -1.79
Ift88Q61371 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ift88Q61371 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ift88Q61371 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Ift88Q61371 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.84□□□□□ -1.79
Ift88Q61371 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm14736-201ENSMUST00000121470 336 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm25624-201ENSMUST00000157222 275 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm25637-201ENSMUST00000157529 107 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm24546-201ENSMUST00000158652 102 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ift88Q61371 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ift88Q61371 Gm26195-201ENSMUST00000175035 101 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm4761-201ENSMUST00000178086 582 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Mir6914-201ENSMUST00000184999 69 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm28506-201ENSMUST00000189937 150 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm29330-201ENSMUST00000190032 699 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm19774-201ENSMUST00000190667 114 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm37455-201ENSMUST00000191993 529 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ift88Q61371 Gm18971-201ENSMUST00000197240 374 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm7041-201ENSMUST00000201227 524 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.83□□□□□ -1.8
Ift88Q61371 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Ift88Q61371 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ift88Q61371 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ift88Q61371 Snora70-201ENSMUST00000083047 137 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ift88Q61371 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ift88Q61371 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ift88Q61371 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Ift88Q61371 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ift88Q61371 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.83□□□□□ -1.8
Ift88Q61371 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ift88Q61371 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm22831-201ENSMUST00000102473 109 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm26418-201ENSMUST00000104275 137 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm15175-201ENSMUST00000117629 132 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm13167-201ENSMUST00000118554 578 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm13314-201ENSMUST00000118742 335 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm14638-201ENSMUST00000121338 216 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm22204-201ENSMUST00000122654 327 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm25341-201ENSMUST00000157461 268 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm25335-201ENSMUST00000158043 103 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm23775-201ENSMUST00000158991 249 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm6374-201ENSMUST00000159051 788 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm3370-201ENSMUST00000171785 500 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm24418-201ENSMUST00000177597 79 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm24639-201ENSMUST00000178518 79 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm23076-201ENSMUST00000179082 79 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm25077-201ENSMUST00000179157 79 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm18486-201ENSMUST00000184040 298 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm29408-201ENSMUST00000187536 216 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm43083-201ENSMUST00000199594 476 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm44472-201ENSMUST00000204922 943 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm45673-201ENSMUST00000210293 358 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Gm7751-201ENSMUST00000212868 709 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm23650-201ENSMUST00000083355 70 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ift88Q61371 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ift88Q61371 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.82□□□□□ -1.8
Ift88Q61371 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ift88Q61371 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm12125-201ENSMUST00000117261 736 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm14670-201ENSMUST00000117327 337 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm12386-201ENSMUST00000117380 688 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm12722-201ENSMUST00000118507 493 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm7363-201ENSMUST00000119883 399 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm25283-201ENSMUST00000157272 77 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm23112-201ENSMUST00000158606 125 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm26219-201ENSMUST00000175216 71 ntBASIC3.81□□□□□ -1.8
Ift88Q61371 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms