Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm22149-201ENSMUST00000104442 136 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm15846-201ENSMUST00000116022 320 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm13574-201ENSMUST00000120482 394 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm7182-201ENSMUST00000193351 732 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm14008-201ENSMUST00000120483 274 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm12313-201ENSMUST00000121347 421 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm15116-201ENSMUST00000122248 663 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm26099-201ENSMUST00000157248 109 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm28802-201ENSMUST00000188624 944 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm12509-201ENSMUST00000118033 609 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Snora69-201ENSMUST00000083708 131 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm22723-201ENSMUST00000083820 129 ntBASIC2.35□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm14602-201ENSMUST00000118625 340 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm20648-201ENSMUST00000175815 328 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm29167-201ENSMUST00000190024 377 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm7530-201ENSMUST00000218466 605 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Gm24611-201ENSMUST00000083272 107 ntBASIC2.34□□□□□ -2.03
Ccdc88aQ5SNZ0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.34□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.34□□□□□ -2.04
Ccdc88aQ5SNZ0 BC022960-201ENSMUST00000119987 1815 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm25728-201ENSMUST00000104525 159 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm22727-201ENSMUST00000158090 116 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Mir8119-201ENSMUST00000183371 129 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm43407-201ENSMUST00000199816 317 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm22829-201ENSMUST00000083771 106 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm24951-201ENSMUST00000102182 109 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Nron-204ENSMUST00000158971 370 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm28794-201ENSMUST00000185276 136 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm19193-201ENSMUST00000190263 590 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm46194-201ENSMUST00000218136 320 ntBASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm15714-201ENSMUST00000117168 250 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm24076-201ENSMUST00000158179 94 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm18415-201ENSMUST00000177464 647 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm23267-201ENSMUST00000178490 132 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm7897-201ENSMUST00000193981 554 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm43550-201ENSMUST00000200597 303 ntBASIC2.32□□□□□ -2.04
Ccdc88aQ5SNZ0 Gm44404-201ENSMUST00000203979 636 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms