Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir208a-201ENSMUST00000083498 83 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm25169-201ENSMUST00000104190 129 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm9043-201ENSMUST00000119677 314 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm7363-201ENSMUST00000119883 399 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm7071-201ENSMUST00000120458 462 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm12071-201ENSMUST00000121968 469 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm24008-201ENSMUST00000157733 138 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm26371-201ENSMUST00000157829 104 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm26362-201ENSMUST00000158865 315 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Mir6351-201ENSMUST00000183826 99 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm43992-201ENSMUST00000204358 197 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm43932-201ENSMUST00000204499 52 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Gm10025-201ENSMUST00000079568 372 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Mir107-201ENSMUST00000083660 87 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trav3-1Q5R1I8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm24469-201ENSMUST00000104487 131 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm12458-201ENSMUST00000119387 495 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm22727-201ENSMUST00000158090 116 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Mir1947-201ENSMUST00000158235 85 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm20673-201ENSMUST00000177167 430 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm22131-201ENSMUST00000178415 94 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm28745-201ENSMUST00000190069 305 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm38075-201ENSMUST00000191979 920 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm44384-201ENSMUST00000200208 114 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Gm44594-201ENSMUST00000208982 407 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trav3-1Q5R1I8 Mir682-201ENSMUST00000102281 96 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm13432-201ENSMUST00000118861 241 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm25412-201ENSMUST00000180258 107 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm43228-201ENSMUST00000200735 264 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm44656-201ENSMUST00000208428 490 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm34272-201ENSMUST00000208886 253 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm25788-201ENSMUST00000082721 131 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm24412-201ENSMUST00000083426 109 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Snora33-201ENSMUST00000093556 129 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trav3-1Q5R1I8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm25539-201ENSMUST00000116886 122 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm13331-201ENSMUST00000117500 448 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm7327-201ENSMUST00000120925 652 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm14049-201ENSMUST00000121009 636 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm14363-201ENSMUST00000122304 409 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm22141-201ENSMUST00000157403 277 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm24552-201ENSMUST00000158646 103 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm23704-201ENSMUST00000158844 340 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms