Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm20534-201ENSMUST00000172957 172 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm22450-201ENSMUST00000179641 107 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm9379-201ENSMUST00000196790 646 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm45273-201ENSMUST00000211559 281 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm26071-201ENSMUST00000083261 107 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm24521-201ENSMUST00000083958 107 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 n-R5s152-201ENSMUST00000093641 119 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm650-201ENSMUST00000144428 1551 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm42717-201ENSMUST00000197309 3463 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm13557-201ENSMUST00000120771 382 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm9003-201ENSMUST00000121810 482 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm23642-201ENSMUST00000157858 258 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm26701-201ENSMUST00000181571 234 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 AC140785.1-201ENSMUST00000217782 383 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 LOC667541-201ENSMUST00000223408 278 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 AC154276.2-201ENSMUST00000227707 309 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Gm4855-201ENSMUST00000192270 1967 ntBASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim41Q5NCC3 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm26500-201ENSMUST00000101867 106 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm25392-201ENSMUST00000157335 297 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm24507-201ENSMUST00000157683 134 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm25817-201ENSMUST00000177758 121 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm24766-201ENSMUST00000179182 121 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm44391-201ENSMUST00000198490 93 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm44960-201ENSMUST00000207403 141 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm39197-201ENSMUST00000212069 457 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Gm29774-201ENSMUST00000219270 436 ntBASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim41Q5NCC3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Mir687-201ENSMUST00000102166 89 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Mir711-201ENSMUST00000102188 82 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm22498-201ENSMUST00000104497 86 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm13457-201ENSMUST00000117885 267 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm15745-201ENSMUST00000119807 115 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm13581-201ENSMUST00000120675 278 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm5958-201ENSMUST00000147698 297 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm22766-201ENSMUST00000158372 99 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm23002-201ENSMUST00000179221 107 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm37713-201ENSMUST00000191746 198 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm18540-201ENSMUST00000204025 526 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 CT010449.1-201ENSMUST00000220624 153 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Gm45093-201ENSMUST00000206859 2463 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC8.15□□□□□ -1.1
Trim41Q5NCC3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Gm44518-201ENSMUST00000208080 4370 ntBASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim41Q5NCC3 AC101945.4-201ENSMUST00000228464 1976 ntBASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Gm37726-201ENSMUST00000193246 3886 ntBASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim41Q5NCC3 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm22212-201ENSMUST00000158096 106 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm23355-201ENSMUST00000177614 107 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm23148-201ENSMUST00000180367 107 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm28872-201ENSMUST00000191518 158 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm37081-201ENSMUST00000192034 196 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm37636-201ENSMUST00000193583 359 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm37796-201ENSMUST00000195327 134 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Gm37562-201ENSMUST00000194763 4328 ntBASIC8.14□□□□□ -1.11
Trim41Q5NCC3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms