Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Gm25161-201ENSMUST00000158913 132 ntBASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Gm23505-201ENSMUST00000158989 130 ntBASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Gm42465-201ENSMUST00000197036 492 ntBASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.65□□□□□ -1.98
Ccdc88bQ4QRL3 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm24280-201ENSMUST00000104237 134 ntBASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm13510-201ENSMUST00000118659 429 ntBASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm5937-201ENSMUST00000119715 643 ntBASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm24630-201ENSMUST00000122768 106 ntBASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.65□□□□□ -1.99
Ccdc88bQ4QRL3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Mir878-201ENSMUST00000104680 78 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm11268-201ENSMUST00000118347 267 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm25051-201ENSMUST00000158602 249 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm45063-201ENSMUST00000203726 472 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.64□□□□□ -1.99
Ccdc88bQ4QRL3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm15526-201ENSMUST00000112504 204 ntBASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm23336-201ENSMUST00000117023 123 ntBASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Mir3098-201ENSMUST00000175416 87 ntBASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm29429-201ENSMUST00000187071 121 ntBASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm7751-201ENSMUST00000212868 709 ntBASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Ccdc88bQ4QRL3 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.62□□□□□ -1.99
Ccdc88bQ4QRL3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.62□□□□□ -1.99
Ccdc88bQ4QRL3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.62□□□□□ -1.99
Ccdc88bQ4QRL3 Gm7909-201ENSMUST00000182688 614 ntBASIC2.62□□□□□ -1.99
Ccdc88bQ4QRL3 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc88bQ4QRL3 Mir343-201ENSMUST00000102360 75 ntBASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Gm29281-201ENSMUST00000188077 381 ntBASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Gm38080-201ENSMUST00000194035 268 ntBASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Gm45687-201ENSMUST00000209454 155 ntBASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Gm20039-201ENSMUST00000210329 394 ntBASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Ccdc88bQ4QRL3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm12401-201ENSMUST00000118435 228 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm15116-201ENSMUST00000122248 663 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm6395-201ENSMUST00000167639 691 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm22353-201ENSMUST00000083918 136 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.6□□□□□ -1.99
Ccdc88bQ4QRL3 Gm22565-201ENSMUST00000175540 69 ntBASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.59□□□□□ -1.99
Ccdc88bQ4QRL3 Gm25416-201ENSMUST00000104221 107 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm22494-201ENSMUST00000104495 128 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm22929-201ENSMUST00000175517 107 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm36994-201ENSMUST00000192941 492 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Gm43841-201ENSMUST00000199491 586 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 Mir423-201ENSMUST00000083584 109 ntBASIC2.58□□□□□ -2
Ccdc88bQ4QRL3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Gm25606-201ENSMUST00000158363 95 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Gm24666-201ENSMUST00000158937 167 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Gm27718-201ENSMUST00000183721 86 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.57□□□□□ -2
Ccdc88bQ4QRL3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Gm23813-201ENSMUST00000175153 77 ntBASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Snord104-201ENSMUST00000083192 70 ntBASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc88bQ4QRL3 Gm12880-201ENSMUST00000120652 494 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms