Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm9009-201ENSMUST00000117321 326 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm14877-201ENSMUST00000119803 478 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm7363-201ENSMUST00000119883 399 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm25784-201ENSMUST00000122524 81 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm25807-201ENSMUST00000122783 305 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm24190-201ENSMUST00000157976 216 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm17119-201ENSMUST00000163943 280 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm24100-201ENSMUST00000178592 79 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm4076-201ENSMUST00000179230 965 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm26189-201ENSMUST00000179879 107 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm24137-201ENSMUST00000180055 79 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm22391-201ENSMUST00000180356 79 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm26585-201ENSMUST00000180890 630 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Mir6541-201ENSMUST00000183649 110 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm27161-201ENSMUST00000183960 562 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Mir6385-201ENSMUST00000184295 105 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm18185-201ENSMUST00000186725 667 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm37337-201ENSMUST00000192601 993 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm37495-201ENSMUST00000194590 264 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm3442-201ENSMUST00000216808 710 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm17890-201ENSMUST00000221419 757 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm22658-201ENSMUST00000104196 155 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm13761-201ENSMUST00000117238 807 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14594-201ENSMUST00000118052 537 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14590-201ENSMUST00000118934 537 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14159-201ENSMUST00000119832 451 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm25519-201ENSMUST00000158392 127 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm16111-201ENSMUST00000162128 285 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Mir3964-201ENSMUST00000174898 74 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm25156-201ENSMUST00000179809 79 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm23379-201ENSMUST00000180026 107 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14596-201ENSMUST00000180268 537 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm14595-201ENSMUST00000180335 537 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm26928-201ENSMUST00000182674 572 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm28597-201ENSMUST00000187664 666 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm44520-201ENSMUST00000205447 802 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm7675-201ENSMUST00000208828 686 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm34779-201ENSMUST00000210036 263 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Gm19786-201ENSMUST00000222589 580 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim40Q3UWA4 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm23744-201ENSMUST00000104231 149 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm22771-201ENSMUST00000104449 91 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm9850-201ENSMUST00000117916 227 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm16171-201ENSMUST00000118004 324 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm8260-201ENSMUST00000119230 353 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm15266-201ENSMUST00000119635 255 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm14867-201ENSMUST00000120156 866 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm11582-201ENSMUST00000121041 236 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm14804-201ENSMUST00000122322 508 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm13602-201ENSMUST00000122405 493 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm24936-201ENSMUST00000122598 247 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm23206-201ENSMUST00000122720 184 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms