Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm44149-201ENSMUST00000204256 226 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm19126-201ENSMUST00000207896 509 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm44654-201ENSMUST00000208052 329 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm7675-201ENSMUST00000208828 686 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm23296-201ENSMUST00000082555 107 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm24859-201ENSMUST00000082729 107 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm22364-201ENSMUST00000083097 98 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm24273-201ENSMUST00000102332 164 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm23063-201ENSMUST00000102350 93 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm14890-201ENSMUST00000117660 676 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm14627-201ENSMUST00000118931 567 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm11471-201ENSMUST00000121824 198 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm5123-201ENSMUST00000121905 837 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm8840-201ENSMUST00000122454 386 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm5755-201ENSMUST00000152394 837 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm23753-201ENSMUST00000157575 149 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm11395-201ENSMUST00000181011 499 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm27599-201ENSMUST00000183758 174 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm27952-201ENSMUST00000184748 105 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm6947-201ENSMUST00000186254 78 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm5829-201ENSMUST00000191383 351 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm37575-201ENSMUST00000195467 309 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm23615-201ENSMUST00000082602 65 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ddb1Q3U1J4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm26145-201ENSMUST00000104476 127 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm13331-201ENSMUST00000117500 448 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm11490-201ENSMUST00000118128 272 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm11904-201ENSMUST00000120562 248 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm4916-201ENSMUST00000126139 642 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm16362-201ENSMUST00000135189 214 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm27718-201ENSMUST00000183721 86 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm28163-201ENSMUST00000187099 325 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm37692-201ENSMUST00000192633 232 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.49□□□□□ -1.69
Ddb1Q3U1J4 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm23577-201ENSMUST00000103950 110 ntBASIC4.48□□□□□ -1.69
Ddb1Q3U1J4 Gm11854-201ENSMUST00000117839 446 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms