Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm29920-201ENSMUST00000206876 754 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm46146-201ENSMUST00000217483 346 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Mir465-201ENSMUST00000093563 74 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm13087-201ENSMUST00000118298 256 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Mir1927-201ENSMUST00000158579 109 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm23053-201ENSMUST00000175136 96 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm29553-201ENSMUST00000189692 279 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm43550-201ENSMUST00000200597 303 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm25796-201ENSMUST00000082645 163 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Snora69-201ENSMUST00000083708 131 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ctdnep1Q3TP92 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm25560-201ENSMUST00000104606 176 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm25529-201ENSMUST00000104850 92 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm14517-201ENSMUST00000119040 337 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm11252-201ENSMUST00000120572 939 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm12721-201ENSMUST00000120621 268 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm22093-201ENSMUST00000158980 111 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm27470-201ENSMUST00000184070 210 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm27964-201ENSMUST00000185195 62 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm37281-201ENSMUST00000192412 439 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm44083-201ENSMUST00000203114 337 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Gm44274-201ENSMUST00000203417 256 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ctdnep1Q3TP92 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm25168-201ENSMUST00000104189 132 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm12509-201ENSMUST00000118033 609 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm22960-201ENSMUST00000122517 104 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm23886-201ENSMUST00000122684 313 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm19641-201ENSMUST00000188432 417 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm20811-201ENSMUST00000190500 553 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm43991-201ENSMUST00000203751 274 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Mir127-201ENSMUST00000093568 70 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ctdnep1Q3TP92 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Gm25728-201ENSMUST00000104525 159 ntBASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Gm12598-201ENSMUST00000117333 830 ntBASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Gm14898-201ENSMUST00000120202 645 ntBASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Gm15037-201ENSMUST00000120358 259 ntBASIC2.51□□□□□ -2.01
Ctdnep1Q3TP92 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms