Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm43550-201ENSMUST00000200597 303 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm46389-201ENSMUST00000223199 392 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Mir127-201ENSMUST00000093568 70 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm8569-201ENSMUST00000117630 647 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm13085-201ENSMUST00000118356 171 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm11943-201ENSMUST00000119473 327 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm25321-201ENSMUST00000122558 102 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm27715-201ENSMUST00000184714 260 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29299-201ENSMUST00000185609 923 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm8392-201ENSMUST00000185647 835 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29335-201ENSMUST00000188361 459 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29573-201ENSMUST00000190291 919 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm37979-201ENSMUST00000193065 712 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm42465-201ENSMUST00000197036 492 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm24044-201ENSMUST00000083107 156 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trim43aQ3TL54 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.49□□□□□ -2.01
Trim43aQ3TL54 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm25047-201ENSMUST00000122667 104 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm22083-201ENSMUST00000157586 102 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm22534-201ENSMUST00000158173 104 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm24358-201ENSMUST00000158424 288 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm24771-201ENSMUST00000158508 137 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm28637-201ENSMUST00000179424 345 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim43aQ3TL54 Gm17929-201ENSMUST00000186851 627 ntBASIC2.48□□□□□ -2.01
Trim43aQ3TL54 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms