Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm25967-201ENSMUST00000157168 147 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm23331-201ENSMUST00000157423 108 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Mir7685-201ENSMUST00000183555 62 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm27158-201ENSMUST00000183813 238 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm42990-201ENSMUST00000199231 312 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm43199-201ENSMUST00000200019 307 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 AC132615.1-201ENSMUST00000213873 255 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm24611-201ENSMUST00000083272 107 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm24929-201ENSMUST00000083403 139 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col9a1Q05722 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm11448-201ENSMUST00000120427 450 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm13092-201ENSMUST00000136346 260 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm23586-201ENSMUST00000157657 123 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm45445-201ENSMUST00000209586 232 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm22154-201ENSMUST00000083844 131 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col9a1Q05722 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Col9a1Q05722 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.25□□□□□ -1.57
Col9a1Q05722 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col9a1Q05722 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm23839-201ENSMUST00000116957 109 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm25176-201ENSMUST00000122640 125 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm24717-201ENSMUST00000157522 124 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm24998-201ENSMUST00000157908 89 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Ang-ps3-201ENSMUST00000177964 433 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm38298-201ENSMUST00000193578 118 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm7449-201ENSMUST00000194393 663 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm44583-201ENSMUST00000207478 281 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.24□□□□□ -1.57
Col9a1Q05722 CU062626.2-201ENSMUST00000223953 274 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 mt-Tt-201ENSMUST00000082422 67 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm25634-201ENSMUST00000082667 105 ntBASIC5.24□□□□□ -1.57
Col9a1Q05722 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Col9a1Q05722 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col9a1Q05722 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.23□□□□□ -1.57
Col9a1Q05722 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.23□□□□□ -1.57
Col9a1Q05722 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.23□□□□□ -1.57
Col9a1Q05722 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col9a1Q05722 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col9a1Q05722 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.23□□□□□ -1.57
Col9a1Q05722 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.23□□□□□ -1.57
Col9a1Q05722 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col9a1Q05722 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col9a1Q05722 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
Col9a1Q05722 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms