Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm25764-201ENSMUST00000104092 134 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm24127-201ENSMUST00000104110 130 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm23709-201ENSMUST00000104364 130 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm23841-201ENSMUST00000116951 114 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm13329-201ENSMUST00000117063 265 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm14890-201ENSMUST00000117660 676 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm14868-201ENSMUST00000117840 216 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm11631-201ENSMUST00000119220 156 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm12779-201ENSMUST00000121496 143 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm14500-201ENSMUST00000121647 113 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm14768-201ENSMUST00000122126 678 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm25104-201ENSMUST00000122476 163 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm23959-201ENSMUST00000157208 324 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm22849-201ENSMUST00000157713 307 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm26490-201ENSMUST00000157879 140 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm24503-201ENSMUST00000158454 135 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm16378-201ENSMUST00000179168 342 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm24968-201ENSMUST00000179817 107 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm27624-201ENSMUST00000185047 177 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm29484-201ENSMUST00000186067 324 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm28872-201ENSMUST00000191518 158 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm46190-201ENSMUST00000219650 427 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm18921-201ENSMUST00000221798 366 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
Col8a1Q00780 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm5265-201ENSMUST00000076828 342 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm26454-201ENSMUST00000082682 107 ntBASIC3.79□□□□□ -1.8
Col8a1Q00780 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col8a1Q00780 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col8a1Q00780 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm8880-201ENSMUST00000121800 454 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm22514-201ENSMUST00000122547 308 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm24371-201ENSMUST00000122662 267 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm3191-201ENSMUST00000167139 346 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm29031-201ENSMUST00000185316 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm29000-201ENSMUST00000185444 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm28204-201ENSMUST00000185934 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm28290-201ENSMUST00000186505 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm28161-201ENSMUST00000186669 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm28749-209ENSMUST00000189599 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm33163-201ENSMUST00000194504 614 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm36954-201ENSMUST00000195362 363 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm32536-201ENSMUST00000205209 445 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm18453-201ENSMUST00000208000 626 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm46993-201ENSMUST00000220708 259 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm9616-201ENSMUST00000221154 781 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm6065-201ENSMUST00000081336 492 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Col8a1Q00780 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm37696-201ENSMUST00000194223 3349 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC3.78□□□□□ -1.8
Col8a1Q00780 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.78□□□□□ -1.8
Col8a1Q00780 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col8a1Q00780 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Col8a1Q00780 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Col8a1Q00780 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Col8a1Q00780 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms