Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm38076-201ENSMUST00000193889 450 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm44016-201ENSMUST00000203463 164 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm43914-201ENSMUST00000203592 594 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm6240-201ENSMUST00000208014 473 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Shmt1P50431 Mir323-201ENSMUST00000083683 86 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Gm25937-201ENSMUST00000083912 107 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shmt1P50431 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.1□□□□□ -1.75
Shmt1P50431 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC4.1□□□□□ -1.75
Shmt1P50431 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shmt1P50431 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shmt1P50431 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Shmt1P50431 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Mir667-201ENSMUST00000102441 92 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm24544-201ENSMUST00000103862 110 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm25565-201ENSMUST00000104605 105 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm14622-201ENSMUST00000117117 468 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm14570-201ENSMUST00000119444 391 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm22839-201ENSMUST00000158436 304 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm25369-201ENSMUST00000158848 132 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm16490-201ENSMUST00000165299 351 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm24415-201ENSMUST00000180218 107 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Mir6481-201ENSMUST00000184617 110 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm28924-201ENSMUST00000190012 241 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm44720-201ENSMUST00000206076 260 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm45252-201ENSMUST00000211579 397 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm4036-201ENSMUST00000220842 626 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Shmt1P50431 Gm22740-201ENSMUST00000083439 109 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Gm5670-201ENSMUST00000093546 372 ntBASIC4.09□□□□□ -1.75
Shmt1P50431 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Shmt1P50431 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Shmt1P50431 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.09□□□□□ -1.76
Shmt1P50431 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.09□□□□□ -1.76
Shmt1P50431 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Shmt1P50431 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Shmt1P50431 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Mir592-201ENSMUST00000102113 96 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Shmt1P50431 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Shmt1P50431 Gm13664-201ENSMUST00000117304 345 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm13439-201ENSMUST00000117541 409 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm12335-201ENSMUST00000119738 327 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm14564-201ENSMUST00000122159 294 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.08□□□□□ -1.76
Shmt1P50431 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.08□□□□□ -1.76
Shmt1P50431 Gm22037-201ENSMUST00000157280 296 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm23581-201ENSMUST00000158531 63 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm25748-201ENSMUST00000175487 70 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm27999-201ENSMUST00000183539 193 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Mir7658-201ENSMUST00000184043 57 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Gm44521-201ENSMUST00000206469 217 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.08□□□□□ -1.76
Shmt1P50431 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Shmt1P50431 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Shmt1P50431 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.08□□□□□ -1.76
Shmt1P50431 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Shmt1P50431 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Shmt1P50431 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.07□□□□□ -1.76
Shmt1P50431 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.07□□□□□ -1.76
Shmt1P50431 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Shmt1P50431 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Shmt1P50431 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Shmt1P50431 Gm12646-201ENSMUST00000119144 238 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms